Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AC005829.2-201ENST00000571422 1056 ntBASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AC010331.1-201ENST00000611423 582 ntBASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 AL135905.2-201ENST00000584934 1404 ntBASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.38■■□□□ 1.17
CNKSR3Q6P9H4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 AC110285.5-201ENST00000611501 352 ntBASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
CNKSR3Q6P9H4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 MIR4785-201ENST00000585005 73 ntBASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CNKSR3Q6P9H4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 PGM5P4-201ENST00000421970 445 ntBASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 KRT18P21-201ENST00000515767 1272 ntBASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CNKSR3Q6P9H4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 KRASP1-201ENST00000407852 552 ntBASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 AC006557.6-201ENST00000623071 864 ntBASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CNKSR3Q6P9H4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.33■■□□□ 1.17
CNKSR3Q6P9H4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.33■■□□□ 1.16
CNKSR3Q6P9H4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
CNKSR3Q6P9H4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNKSR3Q6P9H4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CNKSR3Q6P9H4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.33■■□□□ 1.16
CNKSR3Q6P9H4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 AC113410.3-201ENST00000623366 203 ntBASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
CNKSR3Q6P9H4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms