Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 AC009237.3-201ENST00000393279 1427 ntBASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 BX005040.4-201ENST00000637145 1518 ntBASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
TMEM53Q6P2H8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.74■□□□□ 0.59
TMEM53Q6P2H8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 ZNRF2P3-201ENST00000424200 374 ntBASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 AC019069.1-201ENST00000610008 1333 ntBASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
TMEM53Q6P2H8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 MIR6084-201ENST00000622012 110 ntBASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 AC120498.9-201ENST00000339021 3867 ntBASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM53Q6P2H8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM53Q6P2H8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM53Q6P2H8 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms