Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 AC066615.1-201ENST00000640911 628 ntBASIC18.61■□□□□ 0.57
RTL6Q6ICC9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
RTL6Q6ICC9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RTL6Q6ICC9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 DUSP5P2-201ENST00000426873 1033 ntBASIC18.6■□□□□ 0.57
RTL6Q6ICC9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RTL6Q6ICC9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
RTL6Q6ICC9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RTL6Q6ICC9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 AC245052.3-201ENST00000450182 901 ntBASIC18.58■□□□□ 0.56
RTL6Q6ICC9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RTL6Q6ICC9 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.57■□□□□ 0.56
RTL6Q6ICC9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 AC008687.6-201ENST00000596318 630 ntBASIC18.57■□□□□ 0.56
RTL6Q6ICC9 FAM21FP-204ENST00000608637 956 ntBASIC18.57■□□□□ 0.56
RTL6Q6ICC9 ITM2C-210ENST00000620962 501 ntBASIC18.57■□□□□ 0.56
RTL6Q6ICC9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
RTL6Q6ICC9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms