Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.89■■□□□ 1.41
KRT40Q6A162 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.89■■□□□ 1.41
KRT40Q6A162 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.89■■□□□ 1.41
KRT40Q6A162 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC23.89■■□□□ 1.41
KRT40Q6A162 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 AC011484.1-201ENST00000377652 1995 ntBASIC23.89■■□□□ 1.41
KRT40Q6A162 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KRT40Q6A162 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.88■■□□□ 1.41
KRT40Q6A162 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
KRT40Q6A162 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
KRT40Q6A162 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KRT40Q6A162 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.88■■□□□ 1.41
KRT40Q6A162 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.88■■□□□ 1.41
KRT40Q6A162 CD99P1-205ENST00000527459 561 ntBASIC23.88■■□□□ 1.41
KRT40Q6A162 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC23.88■■□□□ 1.41
KRT40Q6A162 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
KRT40Q6A162 UBE2DNL-204ENST00000602536 740 ntBASIC23.88■■□□□ 1.41
KRT40Q6A162 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
KRT40Q6A162 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.88■■□□□ 1.41
KRT40Q6A162 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.88■■□□□ 1.41
KRT40Q6A162 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
KRT40Q6A162 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
KRT40Q6A162 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.87■■□□□ 1.41
KRT40Q6A162 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 SLC7A5P1-201ENST00000568957 537 ntBASIC23.87■■□□□ 1.41
KRT40Q6A162 BID-214ENST00000617586 542 ntTSL 5 BASIC23.87■■□□□ 1.41
KRT40Q6A162 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.87■■□□□ 1.41
KRT40Q6A162 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.87■■□□□ 1.41
KRT40Q6A162 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
KRT40Q6A162 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
KRT40Q6A162 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC23.86■■□□□ 1.41
KRT40Q6A162 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 NCF1B-203ENST00000435988 1254 ntBASIC23.86■■□□□ 1.41
KRT40Q6A162 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
KRT40Q6A162 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.86■■□□□ 1.41
KRT40Q6A162 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
KRT40Q6A162 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
KRT40Q6A162 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.85■■□□□ 1.41
KRT40Q6A162 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.85■■□□□ 1.41
KRT40Q6A162 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
KRT40Q6A162 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.85■■□□□ 1.41
KRT40Q6A162 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.85■■□□□ 1.41
KRT40Q6A162 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.85■■□□□ 1.41
KRT40Q6A162 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
KRT40Q6A162 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
KRT40Q6A162 RBM17P2-201ENST00000616397 1405 ntBASIC23.84■■□□□ 1.41
KRT40Q6A162 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.84■■□□□ 1.41
KRT40Q6A162 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
KRT40Q6A162 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.84■■□□□ 1.41
KRT40Q6A162 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
KRT40Q6A162 FEM1AP1-201ENST00000431297 1995 ntBASIC23.83■■□□□ 1.41
KRT40Q6A162 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
KRT40Q6A162 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT40Q6A162 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT40Q6A162 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC23.83■■□□□ 1.41
KRT40Q6A162 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.83■■□□□ 1.41
KRT40Q6A162 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT40Q6A162 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
KRT40Q6A162 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
KRT40Q6A162 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT40Q6A162 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT40Q6A162 APTR-205ENST00000447009 902 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT40Q6A162 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
KRT40Q6A162 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.83■■□□□ 1.41
KRT40Q6A162 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.83■■□□□ 1.41
KRT40Q6A162 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC23.83■■□□□ 1.41
KRT40Q6A162 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
KRT40Q6A162 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms