Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
LPCAT4Q643R3 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 NTF6A-201ENST00000591175 560 ntBASIC19.43■□□□□ 0.7
LPCAT4Q643R3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.43■□□□□ 0.7
LPCAT4Q643R3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LPCAT4Q643R3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 AP004607.7-201ENST00000527152 1677 ntBASIC19.41■□□□□ 0.7
LPCAT4Q643R3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LPCAT4Q643R3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 AL034346.1-201ENST00000568244 1277 ntBASIC19.4■□□□□ 0.7
LPCAT4Q643R3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LPCAT4Q643R3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
LPCAT4Q643R3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
LPCAT4Q643R3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 AL451085.2-201ENST00000605085 799 ntBASIC19.39■□□□□ 0.69
LPCAT4Q643R3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LPCAT4Q643R3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms