Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 KRT17P1-201ENST00000399211 1546 ntBASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 AC026310.3-201ENST00000625186 2373 ntBASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CCDC30Q5VVM6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.37■■□□□ 1.81
CCDC30Q5VVM6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 KRT18P68-201ENST00000392293 1000 ntBASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 LSM12P1-201ENST00000411836 588 ntBASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC26.36■■□□□ 1.81
CCDC30Q5VVM6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCDC30Q5VVM6 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CCDC30Q5VVM6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 AC091874.3-201ENST00000512672 1195 ntBASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 MYC-209ENST00000641252 345 ntBASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 AF106564.1-201ENST00000607058 2553 ntBASIC26.33■■□□□ 1.81
CCDC30Q5VVM6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
CCDC30Q5VVM6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 DUSP5P2-201ENST00000426873 1033 ntBASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 AL589743.5-201ENST00000616611 1050 ntBASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
CCDC30Q5VVM6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC26.31■■□□□ 1.8
CCDC30Q5VVM6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms