Protein–RNA interactions for Protein: Q56UQ5

TPT1-like protein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q56UQ5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
Q56UQ5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q56UQ5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Q56UQ5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Q56UQ5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Q56UQ5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 MIR638-201ENST00000385237 100 ntBASIC16.33■□□□□ 0.2
Q56UQ5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.33■□□□□ 0.2
Q56UQ5 AC079140.4-201ENST00000507448 529 ntBASIC16.33■□□□□ 0.2
Q56UQ5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC16.33■□□□□ 0.2
Q56UQ5 AC007952.6-201ENST00000573168 2673 ntBASIC16.33■□□□□ 0.2
Q56UQ5 AC003957.1-201ENST00000625108 2673 ntBASIC16.33■□□□□ 0.2
Q56UQ5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Q56UQ5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Q56UQ5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.33■□□□□ 0.2
Q56UQ5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Q56UQ5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.33■□□□□ 0.2
Q56UQ5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC16.33■□□□□ 0.2
Q56UQ5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.33■□□□□ 0.2
Q56UQ5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.32■□□□□ 0.2
Q56UQ5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.32■□□□□ 0.2
Q56UQ5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Q56UQ5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Q56UQ5 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.31■□□□□ 0.2
Q56UQ5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Q56UQ5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.31■□□□□ 0.2
Q56UQ5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.31■□□□□ 0.2
Q56UQ5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q56UQ5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.31■□□□□ 0.2
Q56UQ5 TPRG1LP1-201ENST00000598702 760 ntBASIC16.31■□□□□ 0.2
Q56UQ5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.31■□□□□ 0.2
Q56UQ5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.31■□□□□ 0.2
Q56UQ5 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Q56UQ5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Q56UQ5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Q56UQ5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC16.3■□□□□ 0.2
Q56UQ5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.3■□□□□ 0.2
Q56UQ5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Q56UQ5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Q56UQ5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.3■□□□□ 0.2
Q56UQ5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Q56UQ5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Q56UQ5 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Q56UQ5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Q56UQ5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.29■□□□□ 0.2
Q56UQ5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC16.29■□□□□ 0.2
Q56UQ5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC16.29■□□□□ 0.2
Q56UQ5 AC053503.5-201ENST00000601508 636 ntBASIC16.29■□□□□ 0.2
Q56UQ5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.29■□□□□ 0.2
Q56UQ5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q56UQ5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms