Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.23■□□□□ 0.99
ALFQ53S48 GUSBP6-202ENST00000438529 1198 ntBASIC21.23■□□□□ 0.99
ALFQ53S48 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.23■□□□□ 0.99
ALFQ53S48 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.23■□□□□ 0.99
ALFQ53S48 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 AC104771.1-201ENST00000603335 964 ntBASIC21.23■□□□□ 0.99
ALFQ53S48 OR10C1-204ENST00000622521 1039 ntBASIC21.23■□□□□ 0.99
ALFQ53S48 AC008694.1-202ENST00000636953 945 ntBASIC21.23■□□□□ 0.99
ALFQ53S48 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.23■□□□□ 0.99
ALFQ53S48 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ALFQ53S48 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ALFQ53S48 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.23■□□□□ 0.99
ALFQ53S48 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ALFQ53S48 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ALFQ53S48 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ALFQ53S48 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.22■□□□□ 0.99
ALFQ53S48 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.22■□□□□ 0.99
ALFQ53S48 AL109923.1-201ENST00000618799 583 ntBASIC21.22■□□□□ 0.99
ALFQ53S48 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
ALFQ53S48 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
ALFQ53S48 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ALFQ53S48 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.21■□□□□ 0.99
ALFQ53S48 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.21■□□□□ 0.99
ALFQ53S48 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.21■□□□□ 0.99
ALFQ53S48 TSPY6P-201ENST00000448518 926 ntBASIC21.21■□□□□ 0.99
ALFQ53S48 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.21■□□□□ 0.99
ALFQ53S48 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.21■□□□□ 0.99
ALFQ53S48 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ALFQ53S48 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
ALFQ53S48 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.2■□□□□ 0.98
ALFQ53S48 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
ALFQ53S48 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.2■□□□□ 0.98
ALFQ53S48 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.2■□□□□ 0.98
ALFQ53S48 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.2■□□□□ 0.98
ALFQ53S48 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.2■□□□□ 0.98
ALFQ53S48 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.2■□□□□ 0.98
ALFQ53S48 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ALFQ53S48 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
ALFQ53S48 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.19■□□□□ 0.98
ALFQ53S48 AC011484.1-201ENST00000377652 1995 ntBASIC21.19■□□□□ 0.98
ALFQ53S48 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.19■□□□□ 0.98
ALFQ53S48 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.19■□□□□ 0.98
ALFQ53S48 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ALFQ53S48 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 AL512625.2-201ENST00000417533 625 ntBASIC21.19■□□□□ 0.98
ALFQ53S48 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.19■□□□□ 0.98
ALFQ53S48 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
ALFQ53S48 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ALFQ53S48 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
ALFQ53S48 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.18■□□□□ 0.98
ALFQ53S48 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.18■□□□□ 0.98
ALFQ53S48 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALFQ53S48 PLK5-205ENST00000642079 1969 ntBASIC21.18■□□□□ 0.98
ALFQ53S48 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ALFQ53S48 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALFQ53S48 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ALFQ53S48 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.18■□□□□ 0.98
ALFQ53S48 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
ALFQ53S48 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ALFQ53S48 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ALFQ53S48 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.18■□□□□ 0.98
ALFQ53S48 AC010980.2-201ENST00000587099 1412 ntBASIC21.18■□□□□ 0.98
ALFQ53S48 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ALFQ53S48 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.18■□□□□ 0.98
ALFQ53S48 AC121338.2-201ENST00000622535 1744 ntBASIC21.18■□□□□ 0.98
ALFQ53S48 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
ALFQ53S48 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALFQ53S48 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALFQ53S48 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.17■□□□□ 0.98
ALFQ53S48 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALFQ53S48 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.17■□□□□ 0.98
ALFQ53S48 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.17■□□□□ 0.98
ALFQ53S48 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.17■□□□□ 0.98
ALFQ53S48 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms