Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 AC019069.1-201ENST00000610008 1333 ntBASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 LINC01521-201ENST00000504184 1943 ntBASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.88■□□□□ 0.45
SNAI3Q3KNW1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 RBM17P2-201ENST00000616397 1405 ntBASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SNAI3Q3KNW1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 AP005212.1-201ENST00000581547 1997 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 AC073130.3-201ENST00000624389 2278 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 AC026271.2-201ENST00000428091 497 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 RARRES2P6-201ENST00000567333 442 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 SLC7A5P1-201ENST00000568957 537 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 AC027702.1-201ENST00000563810 1770 ntBASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SNAI3Q3KNW1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SNAI3Q3KNW1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 AC116050.2-201ENST00000612102 1779 ntBASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SNAI3Q3KNW1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms