Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RFX4Q33E94 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RFX4Q33E94 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX4Q33E94 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.15■□□□□ 0.66
RFX4Q33E94 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RFX4Q33E94 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX4Q33E94 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX4Q33E94 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX4Q33E94 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RFX4Q33E94 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.14■□□□□ 0.65
RFX4Q33E94 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 AL512408.1-201ENST00000569378 2000 ntBASIC19.14■□□□□ 0.65
RFX4Q33E94 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RFX4Q33E94 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.14■□□□□ 0.65
RFX4Q33E94 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.14■□□□□ 0.65
RFX4Q33E94 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RFX4Q33E94 BX323043.1-201ENST00000641006 1765 ntBASIC19.14■□□□□ 0.65
RFX4Q33E94 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RFX4Q33E94 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFX4Q33E94 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RFX4Q33E94 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
RFX4Q33E94 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX4Q33E94 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX4Q33E94 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RFX4Q33E94 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX4Q33E94 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.13■□□□□ 0.65
RFX4Q33E94 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX4Q33E94 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.13■□□□□ 0.65
RFX4Q33E94 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RFX4Q33E94 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.13■□□□□ 0.65
RFX4Q33E94 AC099778.1-201ENST00000568593 1911 ntBASIC19.12■□□□□ 0.65
RFX4Q33E94 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX4Q33E94 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.12■□□□□ 0.65
RFX4Q33E94 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.12■□□□□ 0.65
RFX4Q33E94 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RFX4Q33E94 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.12■□□□□ 0.65
RFX4Q33E94 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX4Q33E94 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RFX4Q33E94 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RFX4Q33E94 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
RFX4Q33E94 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX4Q33E94 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RFX4Q33E94 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.11■□□□□ 0.65
RFX4Q33E94 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX4Q33E94 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
RFX4Q33E94 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.11■□□□□ 0.65
RFX4Q33E94 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.11■□□□□ 0.65
RFX4Q33E94 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX4Q33E94 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RFX4Q33E94 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.11■□□□□ 0.65
RFX4Q33E94 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RFX4Q33E94 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
RFX4Q33E94 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RFX4Q33E94 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
RFX4Q33E94 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.1■□□□□ 0.65
RFX4Q33E94 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RFX4Q33E94 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RFX4Q33E94 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX4Q33E94 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX4Q33E94 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
RFX4Q33E94 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.09■□□□□ 0.65
RFX4Q33E94 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RFX4Q33E94 AC112907.3-201ENST00000577781 2400 ntBASIC19.09■□□□□ 0.65
RFX4Q33E94 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RFX4Q33E94 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms