Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 AL591742.1-201ENST00000604433 565 ntBASIC25.04■■□□□ 1.6
RFX7Q2KHR2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
RFX7Q2KHR2 AC008694.1-202ENST00000636953 945 ntBASIC25.04■■□□□ 1.6
RFX7Q2KHR2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 BX276092.2-201ENST00000417668 665 ntBASIC25.03■■□□□ 1.6
RFX7Q2KHR2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
RFX7Q2KHR2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
RFX7Q2KHR2 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 AC011484.1-201ENST00000377652 1995 ntBASIC25.01■■□□□ 1.59
RFX7Q2KHR2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
RFX7Q2KHR2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
RFX7Q2KHR2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25■■□□□ 1.59
RFX7Q2KHR2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC25■■□□□ 1.59
RFX7Q2KHR2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC25■■□□□ 1.59
RFX7Q2KHR2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC25■■□□□ 1.59
RFX7Q2KHR2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25■■□□□ 1.59
RFX7Q2KHR2 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
RFX7Q2KHR2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25■■□□□ 1.59
RFX7Q2KHR2 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC25■■□□□ 1.59
RFX7Q2KHR2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25■■□□□ 1.59
RFX7Q2KHR2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 SAPCD2P1-201ENST00000395413 1184 ntBASIC24.99■■□□□ 1.59
RFX7Q2KHR2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 AL137060.1-201ENST00000618151 2648 ntBASIC24.99■■□□□ 1.59
RFX7Q2KHR2 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
RFX7Q2KHR2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 POU5F1P3-201ENST00000428824 1078 ntBASIC24.98■■□□□ 1.59
RFX7Q2KHR2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 AC091874.3-201ENST00000512672 1195 ntBASIC24.98■■□□□ 1.59
RFX7Q2KHR2 RNA5SP413-201ENST00000516373 109 ntBASIC24.98■■□□□ 1.59
RFX7Q2KHR2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC24.98■■□□□ 1.59
RFX7Q2KHR2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 AC116050.2-201ENST00000612102 1779 ntBASIC24.97■■□□□ 1.59
RFX7Q2KHR2 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RFX7Q2KHR2 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms