Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 UTP15YMR093W 1542 nt2.88□□□□□ -1.95
PDH1Q12428 YPL216WYPL216W 3309 nt2.88□□□□□ -1.95
PDH1Q12428 SRB4YER022W 2064 nt2.88□□□□□ -1.95
PDH1Q12428 HPA3YEL066W 540 nt2.88□□□□□ -1.95
PDH1Q12428 YGR042WYGR042W 816 nt2.88□□□□□ -1.95
PDH1Q12428 RPN1YHR027C 2982 nt2.88□□□□□ -1.95
PDH1Q12428 RPL16AYIL133C 600 nt2.88□□□□□ -1.95
PDH1Q12428 YIL169CYIL169C 2988 nt2.88□□□□□ -1.95
PDH1Q12428 YIR020CYIR020C 303 nt2.88□□□□□ -1.95
PDH1Q12428 YMR294W-AYMR294W-A 360 nt2.88□□□□□ -1.95
PDH1Q12428 YBL065WYBL065W 345 nt2.88□□□□□ -1.95
PDH1Q12428 RRD2YPL152W 1077 nt2.88□□□□□ -1.95
PDH1Q12428 NTC20YBR188C 423 nt2.88□□□□□ -1.95
PDH1Q12428 ADY4YLR227C 1482 nt2.88□□□□□ -1.95
PDH1Q12428 PCK1YKR097W 1650 nt2.88□□□□□ -1.95
PDH1Q12428 POM152YMR129W 4014 nt2.88□□□□□ -1.95
PDH1Q12428 ILS1YBL076C 3219 nt2.87□□□□□ -1.95
PDH1Q12428 MIX14YDR031W 366 nt2.87□□□□□ -1.95
PDH1Q12428 PAU23YLR037C 375 nt2.87□□□□□ -1.95
PDH1Q12428 SYM1YLR251W 594 nt2.87□□□□□ -1.95
PDH1Q12428 UNG1YML021C 1080 nt2.87□□□□□ -1.95
PDH1Q12428 YNL324WYNL324W 396 nt2.87□□□□□ -1.95
PDH1Q12428 SFM1YOR021C 642 nt2.87□□□□□ -1.95
PDH1Q12428 SNU56YDR240C 1479 nt2.87□□□□□ -1.95
PDH1Q12428 YDR338CYDR338C 2088 nt2.87□□□□□ -1.95
PDH1Q12428 NMD2YHR077C 3270 nt2.87□□□□□ -1.95
PDH1Q12428 NMA111YNL123W 2994 nt2.87□□□□□ -1.95
PDH1Q12428 TMA64YDR117C 1698 nt2.86□□□□□ -1.95
PDH1Q12428 CWC22YGR278W 1734 nt2.86□□□□□ -1.95
PDH1Q12428 TIM11YDR322C-A 291 nt2.86□□□□□ -1.95
PDH1Q12428 YDR537CYDR537C 606 nt2.86□□□□□ -1.95
PDH1Q12428 VPS51YKR020W 495 nt2.86□□□□□ -1.95
PDH1Q12428 AFB1YLR040C 675 nt2.86□□□□□ -1.95
PDH1Q12428 HSP10YOR020C 321 nt2.86□□□□□ -1.95
PDH1Q12428 YOR192C-AYOR192C-A 1317 nt2.86□□□□□ -1.95
PDH1Q12428 ASM4YDL088C 1587 nt2.86□□□□□ -1.95
PDH1Q12428 TCB2YNL087W 3537 nt2.86□□□□□ -1.95
PDH1Q12428 CHS2YBR038W 2892 nt2.86□□□□□ -1.95
PDH1Q12428 RRM3YHR031C 2172 nt2.85□□□□□ -1.95
PDH1Q12428 snR56snR56 88 nt2.85□□□□□ -1.95
PDH1Q12428 RPL9AYGL147C 576 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)G1tW(CCA)G1 72 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)G2tW(CCA)G2 72 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)JtW(CCA)J 72 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)KtW(CCA)K 72 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)MtW(CCA)M 72 nt2.85□□□□□ -1.95
PDH1Q12428 tW(CCA)PtW(CCA)P 72 nt2.85□□□□□ -1.95
PDH1Q12428 YIL175WYIL175W 318 nt2.85□□□□□ -1.95
PDH1Q12428 YJL222W-BYJL222W-B 138 nt2.85□□□□□ -1.95
PDH1Q12428 YLR230WYLR230W 306 nt2.85□□□□□ -1.95
PDH1Q12428 YRR1YOR162C 2433 nt2.85□□□□□ -1.95
PDH1Q12428 DAL5YJR152W 1632 nt2.85□□□□□ -1.95
PDH1Q12428 DYN1YKR054C 12279 nt2.85□□□□□ -1.95
PDH1Q12428 RRI2YOL117W 1938 nt2.85□□□□□ -1.95
PDH1Q12428 SLP1YOR154W 1764 nt2.84□□□□□ -1.95
PDH1Q12428 SSN2YDR443C 4263 nt2.84□□□□□ -1.95
PDH1Q12428 UTP14YML093W 2700 nt2.84□□□□□ -1.95
PDH1Q12428 IRC2YDR112W 309 nt2.84□□□□□ -1.95
PDH1Q12428 ERV1YGR029W 570 nt2.84□□□□□ -1.95
PDH1Q12428 CWC24YLR323C 780 nt2.84□□□□□ -1.95
PDH1Q12428 COX8YLR395C 237 nt2.84□□□□□ -1.95
PDH1Q12428 YML037CYML037C 1023 nt2.84□□□□□ -1.95
PDH1Q12428 YMR173W-AYMR173W-A 1185 nt2.84□□□□□ -1.95
PDH1Q12428 PIS1YPR113W 663 nt2.84□□□□□ -1.95
PDH1Q12428 snR43snR43 209 nt2.84□□□□□ -1.95
PDH1Q12428 KAP104YBR017C 2757 nt2.84□□□□□ -1.95
PDH1Q12428 DUG2YBR281C 2637 nt2.84□□□□□ -1.96
PDH1Q12428 MAL33YBR297W 1407 nt2.84□□□□□ -1.96
PDH1Q12428 NDT80YHR124W 1884 nt2.84□□□□□ -1.96
PDH1Q12428 HNT1YDL125C 477 nt2.83□□□□□ -1.96
PDH1Q12428 ERG28YER044C 447 nt2.83□□□□□ -1.96
PDH1Q12428 PRE4YFR050C 801 nt2.83□□□□□ -1.96
PDH1Q12428 CCW14YLR390W-A 717 nt2.83□□□□□ -1.96
PDH1Q12428 YPR145C-AYPR145C-A 237 nt2.83□□□□□ -1.96
PDH1Q12428 FUN30YAL019W 3396 nt2.83□□□□□ -1.96
PDH1Q12428 MSB2YGR014W 3921 nt2.83□□□□□ -1.96
PDH1Q12428 FAR1YJL157C 2493 nt2.82□□□□□ -1.96
PDH1Q12428 RCY1YJL204C 2523 nt2.82□□□□□ -1.96
PDH1Q12428 RIF1YBR275C 5751 nt2.82□□□□□ -1.96
PDH1Q12428 TAO3YIL129C 7131 nt2.82□□□□□ -1.96
PDH1Q12428 YIL012WYIL012W 342 nt2.82□□□□□ -1.96
PDH1Q12428 SVS1YPL163C 783 nt2.82□□□□□ -1.96
PDH1Q12428 YPR096CYPR096C 303 nt2.82□□□□□ -1.96
PDH1Q12428 UBP16YPL072W 1500 nt2.82□□□□□ -1.96
PDH1Q12428 CCT7YJL111W 1653 nt2.82□□□□□ -1.96
PDH1Q12428 VPS41YDR080W 2979 nt2.81□□□□□ -1.96
PDH1Q12428 AST2YER101C 1293 nt2.81□□□□□ -1.96
PDH1Q12428 COX13YGL191W 390 nt2.81□□□□□ -1.96
PDH1Q12428 SPO13YHR014W 876 nt2.81□□□□□ -1.96
PDH1Q12428 YHR130CYHR130C 336 nt2.81□□□□□ -1.96
PDH1Q12428 SDH3YKL141W 597 nt2.81□□□□□ -1.96
PDH1Q12428 YLR171WYLR171W 390 nt2.81□□□□□ -1.96
PDH1Q12428 PBI2YNL015W 228 nt2.81□□□□□ -1.96
PDH1Q12428 snR191snR191 274 nt2.81□□□□□ -1.96
PDH1Q12428 FIR1YER032W 2631 nt2.81□□□□□ -1.96
PDH1Q12428 ICR1ICR1 3199 nt2.81□□□□□ -1.96
PDH1Q12428 PDR3YBL005W 2931 nt2.8□□□□□ -1.96
PDH1Q12428 TRM2YKR056W 1920 nt2.8□□□□□ -1.96
PDH1Q12428 YHR078WYHR078W 1659 nt2.8□□□□□ -1.96
PDH1Q12428 YKL044WYKL044W 321 nt2.8□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 26.7 ms