Protein–RNA interactions for Protein: Q12242

RUP1, UBA domain-containing protein RUP1, yeastyeast

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RUP1Q12242 SRP21YKL122C 504 nt2.52□□□□□ -2.01
RUP1Q12242 ECM9YKR004C 1134 nt2.52□□□□□ -2.01
RUP1Q12242 PAU23YLR037C 375 nt2.52□□□□□ -2.01
RUP1Q12242 NYV1YLR093C 762 nt2.52□□□□□ -2.01
RUP1Q12242 SAS2YMR127C 1017 nt2.52□□□□□ -2.01
RUP1Q12242 YMR187CYMR187C 1296 nt2.52□□□□□ -2.01
RUP1Q12242 YNL303WYNL303W 348 nt2.52□□□□□ -2.01
RUP1Q12242 YNR021WYNR021W 1215 nt2.52□□□□□ -2.01
RUP1Q12242 RRD2YPL152W 1077 nt2.52□□□□□ -2.01
RUP1Q12242 YPL276WYPL276W 438 nt2.52□□□□□ -2.01
RUP1Q12242 RPN3YER021W 1572 nt2.52□□□□□ -2.01
RUP1Q12242 GIN4YDR507C 3429 nt2.51□□□□□ -2.01
RUP1Q12242 DAD1YDR016C 285 nt2.51□□□□□ -2.01
RUP1Q12242 YFL012W-AYFL012W-A 375 nt2.51□□□□□ -2.01
RUP1Q12242 ERV1YGR029W 570 nt2.51□□□□□ -2.01
RUP1Q12242 YGR109W-AYGR109W-A 873 nt2.51□□□□□ -2.01
RUP1Q12242 YIL082WYIL082W 873 nt2.51□□□□□ -2.01
RUP1Q12242 YJL086CYJL086C 369 nt2.51□□□□□ -2.01
RUP1Q12242 ACF4YJR083C 930 nt2.51□□□□□ -2.01
RUP1Q12242 YNR025CYNR025C 360 nt2.51□□□□□ -2.01
RUP1Q12242 ESF2YNR054C 951 nt2.51□□□□□ -2.01
RUP1Q12242 RRG8YPR116W 834 nt2.51□□□□□ -2.01
RUP1Q12242 HAA1YPR008W 2085 nt2.51□□□□□ -2.01
RUP1Q12242 DUG2YBR281C 2637 nt2.51□□□□□ -2.01
RUP1Q12242 IKI3YLR384C 4050 nt2.51□□□□□ -2.01
RUP1Q12242 CWC22YGR278W 1734 nt2.51□□□□□ -2.01
RUP1Q12242 SUL1YBR294W 2580 nt2.51□□□□□ -2.01
RUP1Q12242 AYT1YLL063C 1425 nt2.51□□□□□ -2.01
RUP1Q12242 KAR9YPL269W 1935 nt2.5□□□□□ -2.01
RUP1Q12242 DAL5YJR152W 1632 nt2.5□□□□□ -2.01
RUP1Q12242 FIR1YER032W 2631 nt2.5□□□□□ -2.01
RUP1Q12242 NFT1YKR103W 3657 nt2.5□□□□□ -2.01
RUP1Q12242 snR9snR9 187 nt2.5□□□□□ -2.01
RUP1Q12242 UBC5YDR059C 447 nt2.5□□□□□ -2.01
RUP1Q12242 TMA20YER007C-A 546 nt2.5□□□□□ -2.01
RUP1Q12242 YMR31YFR049W 372 nt2.5□□□□□ -2.01
RUP1Q12242 PRP38YGR075C 729 nt2.5□□□□□ -2.01
RUP1Q12242 YGR242WYGR242W 309 nt2.5□□□□□ -2.01
RUP1Q12242 BET3YKR068C 582 nt2.5□□□□□ -2.01
RUP1Q12242 GIM3YNL153C 390 nt2.5□□□□□ -2.01
RUP1Q12242 YOL029CYOL029C 606 nt2.5□□□□□ -2.01
RUP1Q12242 snR189snR189 189 nt2.5□□□□□ -2.01
RUP1Q12242 JID1YPR061C 906 nt2.5□□□□□ -2.01
RUP1Q12242 SVL3YPL032C 2478 nt2.5□□□□□ -2.01
RUP1Q12242 APC2YLR127C 2562 nt2.5□□□□□ -2.01
RUP1Q12242 YDR179W-AYDR179W-A 1392 nt2.49□□□□□ -2.01
RUP1Q12242 STD1YOR047C 1335 nt2.49□□□□□ -2.01
RUP1Q12242 TRM2YKR056W 1920 nt2.49□□□□□ -2.01
RUP1Q12242 TIF35YDR429C 825 nt2.49□□□□□ -2.01
RUP1Q12242 YER107W-AYER107W-A 321 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)G1tW(CCA)G1 72 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)G2tW(CCA)G2 72 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)JtW(CCA)J 72 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)KtW(CCA)K 72 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)MtW(CCA)M 72 nt2.49□□□□□ -2.01
RUP1Q12242 tW(CCA)PtW(CCA)P 72 nt2.49□□□□□ -2.01
RUP1Q12242 RPS1AYLR441C 768 nt2.49□□□□□ -2.01
RUP1Q12242 PEP12YOR036W 867 nt2.49□□□□□ -2.01
RUP1Q12242 YOR055WYOR055W 435 nt2.49□□□□□ -2.01
RUP1Q12242 YBR209WYBR209W 318 nt2.49□□□□□ -2.01
RUP1Q12242 DNL4YOR005C 2835 nt2.48□□□□□ -2.01
RUP1Q12242 COG3YER157W 2406 nt2.48□□□□□ -2.01
RUP1Q12242 RSE1YML049C 4086 nt2.48□□□□□ -2.01
RUP1Q12242 SHE4YOR035C 2370 nt2.48□□□□□ -2.01
RUP1Q12242 YDR461C-AYDR461C-A 243 nt2.48□□□□□ -2.01
RUP1Q12242 HYP2YEL034W 474 nt2.48□□□□□ -2.01
RUP1Q12242 MPO1YGL010W 525 nt2.48□□□□□ -2.01
RUP1Q12242 YGR018CYGR018C 330 nt2.48□□□□□ -2.01
RUP1Q12242 FYV4YHR059W 393 nt2.48□□□□□ -2.01
RUP1Q12242 YIL068W-AYIL068W-A 384 nt2.48□□□□□ -2.01
RUP1Q12242 MRPL33YMR286W 261 nt2.48□□□□□ -2.01
RUP1Q12242 YNL150WYNL150W 408 nt2.48□□□□□ -2.01
RUP1Q12242 SWM2YNR004W 441 nt2.48□□□□□ -2.01
RUP1Q12242 CSM4YPL200W 471 nt2.48□□□□□ -2.01
RUP1Q12242 NEL1YHR035W 1893 nt2.48□□□□□ -2.01
RUP1Q12242 UBP16YPL072W 1500 nt2.47□□□□□ -2.01
RUP1Q12242 FUS1YCL027W 1539 nt2.47□□□□□ -2.01
RUP1Q12242 SPB1YCL054W 2526 nt2.47□□□□□ -2.01
RUP1Q12242 FKS3YMR306W 5358 nt2.47□□□□□ -2.01
RUP1Q12242 VPS74YDR372C 1038 nt2.47□□□□□ -2.01
RUP1Q12242 YHR054CYHR054C 1065 nt2.47□□□□□ -2.01
RUP1Q12242 SFM1YOR021C 642 nt2.47□□□□□ -2.01
RUP1Q12242 PUF4YGL014W 2667 nt2.47□□□□□ -2.01
RUP1Q12242 CSF1YLR087C 8877 nt2.47□□□□□ -2.01
RUP1Q12242 NPR3YHL023C 3441 nt2.46□□□□□ -2.02
RUP1Q12242 YRR1YOR162C 2433 nt2.46□□□□□ -2.02
RUP1Q12242 YDR199WYDR199W 366 nt2.46□□□□□ -2.02
RUP1Q12242 YDR537CYDR537C 606 nt2.46□□□□□ -2.02
RUP1Q12242 NOP19YGR251W 591 nt2.46□□□□□ -2.02
RUP1Q12242 ATP18YML081C-A 180 nt2.46□□□□□ -2.02
RUP1Q12242 MPP6YNR024W 561 nt2.46□□□□□ -2.02
RUP1Q12242 ARR2YPR200C 393 nt2.46□□□□□ -2.02
RUP1Q12242 SNF12YNR023W 1701 nt2.45□□□□□ -2.02
RUP1Q12242 GAL80YML051W 1308 nt2.45□□□□□ -2.02
RUP1Q12242 UTP14YML093W 2700 nt2.45□□□□□ -2.02
RUP1Q12242 RPS26BYER131W 360 nt2.45□□□□□ -2.02
RUP1Q12242 YGL042CYGL042C 306 nt2.45□□□□□ -2.02
RUP1Q12242 YMR144WYMR144W 1029 nt2.45□□□□□ -2.02
RUP1Q12242 FPR1YNL135C 345 nt2.45□□□□□ -2.02
RUP1Q12242 YAP7YOL028C 738 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 37.6 ms