Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 ATP16YDL004W 483 nt2.43□□□□□ -2.02
VTI1Q04338 GET1YGL020C 708 nt2.43□□□□□ -2.02
VTI1Q04338 ACB1YGR037C 264 nt2.43□□□□□ -2.02
VTI1Q04338 RSM27YGR215W 333 nt2.43□□□□□ -2.02
VTI1Q04338 YJL032WYJL032W 315 nt2.43□□□□□ -2.02
VTI1Q04338 ATG10YLL042C 504 nt2.43□□□□□ -2.02
VTI1Q04338 YLR224WYLR224W 1110 nt2.43□□□□□ -2.02
VTI1Q04338 SGT1YOR057W 1188 nt2.43□□□□□ -2.02
VTI1Q04338 YBR063CYBR063C 1215 nt2.43□□□□□ -2.02
VTI1Q04338 ATP20YPR020W 348 nt2.43□□□□□ -2.02
VTI1Q04338 YDR261W-AYDR261W-A 1317 nt2.42□□□□□ -2.02
VTI1Q04338 STD1YOR047C 1335 nt2.42□□□□□ -2.02
VTI1Q04338 PSK2YOL045W 3306 nt2.42□□□□□ -2.02
VTI1Q04338 IRA2YOL081W 9240 nt2.42□□□□□ -2.02
VTI1Q04338 tC(GCA)BtC(GCA)B 72 nt2.42□□□□□ -2.02
VTI1Q04338 tC(GCA)GtC(GCA)G 72 nt2.42□□□□□ -2.02
VTI1Q04338 tC(GCA)P1tC(GCA)P1 72 nt2.42□□□□□ -2.02
VTI1Q04338 tC(GCA)P2tC(GCA)P2 72 nt2.42□□□□□ -2.02
VTI1Q04338 MVB12YGR206W 306 nt2.42□□□□□ -2.02
VTI1Q04338 GOS1YHL031C 672 nt2.42□□□□□ -2.02
VTI1Q04338 YHL048C-AYHL048C-A 135 nt2.42□□□□□ -2.02
VTI1Q04338 YKL115CYKL115C 393 nt2.42□□□□□ -2.02
VTI1Q04338 FAR3YMR052W 615 nt2.42□□□□□ -2.02
VTI1Q04338 CUP9YPL177C 921 nt2.42□□□□□ -2.02
VTI1Q04338 YPR014CYPR014C 330 nt2.42□□□□□ -2.02
VTI1Q04338 RPC40YPR110C 1008 nt2.42□□□□□ -2.02
VTI1Q04338 RFC5YBR087W 1065 nt2.42□□□□□ -2.02
VTI1Q04338 PIG2YIL045W 1617 nt2.42□□□□□ -2.02
VTI1Q04338 MSL5YLR116W 1431 nt2.42□□□□□ -2.02
VTI1Q04338 PRP6YBR055C 2700 nt2.41□□□□□ -2.02
VTI1Q04338 TFC3YAL001C 3483 nt2.41□□□□□ -2.02
VTI1Q04338 YCR099CYCR099C 468 nt2.41□□□□□ -2.02
VTI1Q04338 TVP15YDR100W 432 nt2.41□□□□□ -2.02
VTI1Q04338 ATC1YDR184C 885 nt2.41□□□□□ -2.02
VTI1Q04338 YEA4YEL004W 1029 nt2.41□□□□□ -2.02
VTI1Q04338 RMD6YEL072W 696 nt2.41□□□□□ -2.02
VTI1Q04338 BTN2YGR142W 1233 nt2.41□□□□□ -2.02
VTI1Q04338 CKA1YIL035C 1119 nt2.41□□□□□ -2.02
VTI1Q04338 YJL147CYJL147C 1149 nt2.41□□□□□ -2.02
VTI1Q04338 YJR020WYJR020W 333 nt2.41□□□□□ -2.02
VTI1Q04338 CAP1YKL007W 807 nt2.41□□□□□ -2.02
VTI1Q04338 RSA1YPL193W 1146 nt2.41□□□□□ -2.02
VTI1Q04338 SSD1YDR293C 3753 nt2.41□□□□□ -2.02
VTI1Q04338 PDR3YBL005W 2931 nt2.41□□□□□ -2.02
VTI1Q04338 COS111YBR203W 2775 nt2.4□□□□□ -2.02
VTI1Q04338 GPI17YDR434W 1605 nt2.4□□□□□ -2.03
VTI1Q04338 YIL166CYIL166C 1629 nt2.4□□□□□ -2.03
VTI1Q04338 GLC7YER133W 939 nt2.4□□□□□ -2.03
VTI1Q04338 RPC25YKL144C 639 nt2.4□□□□□ -2.03
VTI1Q04338 NTC20YBR188C 423 nt2.4□□□□□ -2.03
VTI1Q04338 YPR089WYPR089W 2667 nt2.4□□□□□ -2.03
VTI1Q04338 SAP185YJL098W 3177 nt2.39□□□□□ -2.03
VTI1Q04338 YKL075CYKL075C 1353 nt2.39□□□□□ -2.03
VTI1Q04338 UBP16YPL072W 1500 nt2.39□□□□□ -2.03
VTI1Q04338 STE2YFL026W 1296 nt2.39□□□□□ -2.03
VTI1Q04338 YLR257WYLR257W 966 nt2.39□□□□□ -2.03
VTI1Q04338 YNR034W-AYNR034W-A 297 nt2.39□□□□□ -2.03
VTI1Q04338 SME1YOR159C 285 nt2.39□□□□□ -2.03
VTI1Q04338 VPS16YPL045W 2397 nt2.38□□□□□ -2.03
VTI1Q04338 TAE2YPL009C 3117 nt2.38□□□□□ -2.03
VTI1Q04338 snR83snR83 306 nt2.38□□□□□ -2.03
VTI1Q04338 YPT52YKR014C 705 nt2.38□□□□□ -2.03
VTI1Q04338 YLR217WYLR217W 324 nt2.38□□□□□ -2.03
VTI1Q04338 RRT16YNL105W 429 nt2.38□□□□□ -2.03
VTI1Q04338 DAD3YBR233W-A 285 nt2.38□□□□□ -2.03
VTI1Q04338 JIP5YPR169W 1479 nt2.38□□□□□ -2.03
VTI1Q04338 UBX3YDL091C 1368 nt2.37□□□□□ -2.03
VTI1Q04338 ESC2YDR363W 1371 nt2.37□□□□□ -2.03
VTI1Q04338 YFR016CYFR016C 3702 nt2.37□□□□□ -2.03
VTI1Q04338 YDR381C-AYDR381C-A 345 nt2.37□□□□□ -2.03
VTI1Q04338 VAB2YEL005C 849 nt2.37□□□□□ -2.03
VTI1Q04338 YLR050CYLR050C 486 nt2.37□□□□□ -2.03
VTI1Q04338 YKE2YLR200W 345 nt2.37□□□□□ -2.03
VTI1Q04338 IGO1YNL157W 507 nt2.37□□□□□ -2.03
VTI1Q04338 UFD4YKL010C 4452 nt2.37□□□□□ -2.03
VTI1Q04338 ESA1YOR244W 1338 nt2.37□□□□□ -2.03
VTI1Q04338 CLN3YAL040C 1743 nt2.37□□□□□ -2.03
VTI1Q04338 NGG1YDR176W 2109 nt2.36□□□□□ -2.03
VTI1Q04338 BFR1YOR198C 1413 nt2.36□□□□□ -2.03
VTI1Q04338 Q0144Q0144 330 nt2.36□□□□□ -2.03
VTI1Q04338 TAZ1YPR140W 1146 nt2.36□□□□□ -2.03
VTI1Q04338 ARP5YNL059C 2268 nt2.36□□□□□ -2.03
VTI1Q04338 NPR1YNL183C 2373 nt2.36□□□□□ -2.03
VTI1Q04338 YER046W-AYER046W-A 330 nt2.35□□□□□ -2.03
VTI1Q04338 RCN1YKL159C 636 nt2.35□□□□□ -2.03
VTI1Q04338 YLL044WYLL044W 447 nt2.35□□□□□ -2.03
VTI1Q04338 YNL303WYNL303W 348 nt2.35□□□□□ -2.03
VTI1Q04338 YPR145C-AYPR145C-A 237 nt2.35□□□□□ -2.03
VTI1Q04338 SHG1YBR258C 429 nt2.35□□□□□ -2.03
VTI1Q04338 MMS22YLR320W 4365 nt2.35□□□□□ -2.03
VTI1Q04338 SEC16YPL085W 6588 nt2.35□□□□□ -2.03
VTI1Q04338 YJL181WYJL181W 1836 nt2.34□□□□□ -2.03
VTI1Q04338 YJL052C-AYJL052C-A 120 nt2.34□□□□□ -2.03
VTI1Q04338 SEC66YBR171W 621 nt2.34□□□□□ -2.03
VTI1Q04338 snR43snR43 209 nt2.34□□□□□ -2.03
VTI1Q04338 NSE4YDL105W 1209 nt2.33□□□□□ -2.04
VTI1Q04338 URA5YML106W 681 nt2.33□□□□□ -2.04
VTI1Q04338 GRE2YOL151W 1029 nt2.33□□□□□ -2.04
VTI1Q04338 VMA9YCL005W-A 222 nt2.33□□□□□ -2.04
VTI1Q04338 SAP190YKR028W 3102 nt2.33□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 16 ms