Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 NYV1YLR093C 762 nt2.57□□□□□ -2
RPN9Q04062 IRC21YMR073C 606 nt2.57□□□□□ -2
RPN9Q04062 GIM3YNL153C 390 nt2.57□□□□□ -2
RPN9Q04062 YPR147CYPR147C 915 nt2.57□□□□□ -2
RPN9Q04062 UBX3YDL091C 1368 nt2.57□□□□□ -2
RPN9Q04062 HAA1YPR008W 2085 nt2.57□□□□□ -2
RPN9Q04062 BFR1YOR198C 1413 nt2.57□□□□□ -2
RPN9Q04062 RPN3YER021W 1572 nt2.57□□□□□ -2
RPN9Q04062 YIL080WYIL080W 4722 nt2.56□□□□□ -2
RPN9Q04062 MST27YGL051W 705 nt2.56□□□□□ -2
RPN9Q04062 PRP21YJL203W 843 nt2.56□□□□□ -2
RPN9Q04062 FPR1YNL135C 345 nt2.56□□□□□ -2
RPN9Q04062 YNR025CYNR025C 360 nt2.56□□□□□ -2
RPN9Q04062 YOL085W-AYOL085W-A 213 nt2.56□□□□□ -2
RPN9Q04062 SFM1YOR021C 642 nt2.56□□□□□ -2
RPN9Q04062 YLR001CYLR001C 2589 nt2.56□□□□□ -2
RPN9Q04062 GCD10YNL062C 1437 nt2.56□□□□□ -2
RPN9Q04062 DNL4YOR005C 2835 nt2.55□□□□□ -2
RPN9Q04062 NPR3YHL023C 3441 nt2.55□□□□□ -2
RPN9Q04062 SEC26YDR238C 2922 nt2.55□□□□□ -2
RPN9Q04062 FAR7YFR008W 666 nt2.55□□□□□ -2
RPN9Q04062 YHR032W-AYHR032W-A 180 nt2.55□□□□□ -2
RPN9Q04062 PEX18YHR160C 852 nt2.55□□□□□ -2
RPN9Q04062 YKL075CYKL075C 1353 nt2.55□□□□□ -2
RPN9Q04062 SRP21YKL122C 504 nt2.55□□□□□ -2
RPN9Q04062 RPS1AYLR441C 768 nt2.55□□□□□ -2
RPN9Q04062 COQ10YOL008W 624 nt2.55□□□□□ -2
RPN9Q04062 YOL134CYOL134C 390 nt2.55□□□□□ -2
RPN9Q04062 SGT1YOR057W 1188 nt2.55□□□□□ -2
RPN9Q04062 YBR085C-AYBR085C-A 258 nt2.55□□□□□ -2
RPN9Q04062 MUD1YBR119W 897 nt2.55□□□□□ -2
RPN9Q04062 RLI1YDR091C 1827 nt2.54□□□□□ -2
RPN9Q04062 RTS3YGR161C 792 nt2.54□□□□□ -2
RPN9Q04062 YJL086CYJL086C 369 nt2.54□□□□□ -2
RPN9Q04062 YMR173W-AYMR173W-A 1185 nt2.54□□□□□ -2
RPN9Q04062 YNL150WYNL150W 408 nt2.54□□□□□ -2
RPN9Q04062 YOL029CYOL029C 606 nt2.54□□□□□ -2
RPN9Q04062 ISU1YPL135W 498 nt2.54□□□□□ -2
RPN9Q04062 ACM1YPL267W 630 nt2.54□□□□□ -2
RPN9Q04062 TRZ1YKR079C 2517 nt2.54□□□□□ -2
RPN9Q04062 COG3YER157W 2406 nt2.54□□□□□ -2
RPN9Q04062 YRR1YOR162C 2433 nt2.54□□□□□ -2
RPN9Q04062 PSD2YGR170W 3417 nt2.54□□□□□ -2
RPN9Q04062 MES1YGR264C 2256 nt2.54□□□□□ -2
RPN9Q04062 PFF1YBR074W 2931 nt2.54□□□□□ -2
RPN9Q04062 IRA2YOL081W 9240 nt2.53□□□□□ -2
RPN9Q04062 MFB1YDR219C 1398 nt2.53□□□□□ -2
RPN9Q04062 STD1YOR047C 1335 nt2.53□□□□□ -2
RPN9Q04062 YDR461C-AYDR461C-A 243 nt2.53□□□□□ -2
RPN9Q04062 YJR087WYJR087W 351 nt2.53□□□□□ -2
RPN9Q04062 YAL042C-AYAL042C-A 378 nt2.53□□□□□ -2
RPN9Q04062 ATG38YLR211C 681 nt2.53□□□□□ -2
RPN9Q04062 KTI11YBL071W-A 249 nt2.53□□□□□ -2
RPN9Q04062 ESF2YNR054C 951 nt2.53□□□□□ -2
RPN9Q04062 YAP7YOL028C 738 nt2.53□□□□□ -2
RPN9Q04062 YOR169CYOR169C 465 nt2.53□□□□□ -2
RPN9Q04062 CSM4YPL200W 471 nt2.53□□□□□ -2
RPN9Q04062 TAZ1YPR140W 1146 nt2.53□□□□□ -2
RPN9Q04062 SIP3YNL257C 3690 nt2.53□□□□□ -2
RPN9Q04062 PUF4YGL014W 2667 nt2.53□□□□□ -2.01
RPN9Q04062 RLF2YPR018W 1821 nt2.52□□□□□ -2.01
RPN9Q04062 snR9snR9 187 nt2.52□□□□□ -2.01
RPN9Q04062 YDR018CYDR018C 1191 nt2.52□□□□□ -2.01
RPN9Q04062 UBC5YDR059C 447 nt2.52□□□□□ -2.01
RPN9Q04062 NCB2YDR397C 441 nt2.52□□□□□ -2.01
RPN9Q04062 TMA20YER007C-A 546 nt2.52□□□□□ -2.01
RPN9Q04062 OTU2YHL013C 924 nt2.52□□□□□ -2.01
RPN9Q04062 YHR054CYHR054C 1065 nt2.52□□□□□ -2.01
RPN9Q04062 SDL1YIL167W 633 nt2.52□□□□□ -2.01
RPN9Q04062 YLR224WYLR224W 1110 nt2.52□□□□□ -2.01
RPN9Q04062 YNR034W-AYNR034W-A 297 nt2.52□□□□□ -2.01
RPN9Q04062 PDR11YIL013C 4236 nt2.52□□□□□ -2.01
RPN9Q04062 YEF3YLR249W 3135 nt2.52□□□□□ -2.01
RPN9Q04062 YDR179W-AYDR179W-A 1392 nt2.51□□□□□ -2.01
RPN9Q04062 snR59snR59 78 nt2.51□□□□□ -2.01
RPN9Q04062 PRE1YER012W 597 nt2.51□□□□□ -2.01
RPN9Q04062 PRP38YGR075C 729 nt2.51□□□□□ -2.01
RPN9Q04062 YGR242WYGR242W 309 nt2.51□□□□□ -2.01
RPN9Q04062 YMR187CYMR187C 1296 nt2.51□□□□□ -2.01
RPN9Q04062 YMR194C-AYMR194C-A 225 nt2.51□□□□□ -2.01
RPN9Q04062 PEP12YOR036W 867 nt2.51□□□□□ -2.01
RPN9Q04062 NEL1YHR035W 1893 nt2.51□□□□□ -2.01
RPN9Q04062 DNA2YHR164C 4569 nt2.51□□□□□ -2.01
RPN9Q04062 NEW1YPL226W 3591 nt2.51□□□□□ -2.01
RPN9Q04062 DAL5YJR152W 1632 nt2.5□□□□□ -2.01
RPN9Q04062 NPR1YNL183C 2373 nt2.5□□□□□ -2.01
RPN9Q04062 snR76snR76 109 nt2.5□□□□□ -2.01
RPN9Q04062 ACF4YJR083C 930 nt2.5□□□□□ -2.01
RPN9Q04062 ATP18YML081C-A 180 nt2.5□□□□□ -2.01
RPN9Q04062 YKR078WYKR078W 1758 nt2.5□□□□□ -2.01
RPN9Q04062 PTP3YER075C 2787 nt2.49□□□□□ -2.01
RPN9Q04062 TOP2YNL088W 4287 nt2.49□□□□□ -2.01
RPN9Q04062 SWR1YDR334W 4545 nt2.49□□□□□ -2.01
RPN9Q04062 RPS26BYER131W 360 nt2.49□□□□□ -2.01
RPN9Q04062 SGM1YJR134C 2124 nt2.49□□□□□ -2.01
RPN9Q04062 RPL36AYMR194W 303 nt2.49□□□□□ -2.01
RPN9Q04062 YOR050CYOR050C 348 nt2.49□□□□□ -2.01
RPN9Q04062 SDC25YLL016W 3147 nt2.49□□□□□ -2.01
RPN9Q04062 GIN4YDR507C 3429 nt2.49□□□□□ -2.01
RPN9Q04062 SHE4YOR035C 2370 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 23.2 ms