Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SLC7A5P1-201ENST00000568957 537 ntBASIC19.61■□□□□ 0.73
RAE1P78406 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAE1P78406 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.61■□□□□ 0.73
RAE1P78406 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAE1P78406 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.61■□□□□ 0.73
RAE1P78406 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAE1P78406 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAE1P78406 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAE1P78406 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RAE1P78406 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
RAE1P78406 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RAE1P78406 AC091799.1-201ENST00000422823 811 ntBASIC19.6■□□□□ 0.73
RAE1P78406 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAE1P78406 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAE1P78406 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RAE1P78406 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAE1P78406 AC116050.2-201ENST00000612102 1779 ntBASIC19.6■□□□□ 0.73
RAE1P78406 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
RAE1P78406 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.59■□□□□ 0.73
RAE1P78406 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.59■□□□□ 0.73
RAE1P78406 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.59■□□□□ 0.73
RAE1P78406 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.59■□□□□ 0.73
RAE1P78406 NTF6G-201ENST00000591094 616 ntBASIC19.59■□□□□ 0.73
RAE1P78406 UBE2DNL-204ENST00000602536 740 ntBASIC19.59■□□□□ 0.73
RAE1P78406 AC087623.3-201ENST00000607047 1098 ntBASIC19.59■□□□□ 0.73
RAE1P78406 AC243732.1-201ENST00000612648 864 ntBASIC19.59■□□□□ 0.73
RAE1P78406 MIR6821-201ENST00000617625 74 ntBASIC19.59■□□□□ 0.73
RAE1P78406 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.59■□□□□ 0.73
RAE1P78406 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAE1P78406 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RAE1P78406 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.58■□□□□ 0.73
RAE1P78406 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.58■□□□□ 0.73
RAE1P78406 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.58■□□□□ 0.73
RAE1P78406 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.58■□□□□ 0.73
RAE1P78406 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RAE1P78406 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAE1P78406 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RAE1P78406 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
RAE1P78406 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RAE1P78406 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 AC034268.1-201ENST00000441047 882 ntBASIC19.58■□□□□ 0.72
RAE1P78406 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.58■□□□□ 0.72
RAE1P78406 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.58■□□□□ 0.72
RAE1P78406 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.58■□□□□ 0.72
RAE1P78406 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.58■□□□□ 0.72
RAE1P78406 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAE1P78406 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.57■□□□□ 0.72
RAE1P78406 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.57■□□□□ 0.72
RAE1P78406 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.57■□□□□ 0.72
RAE1P78406 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.57■□□□□ 0.72
RAE1P78406 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.57■□□□□ 0.72
RAE1P78406 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RAE1P78406 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.57■□□□□ 0.72
RAE1P78406 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RAE1P78406 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RAE1P78406 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.56■□□□□ 0.72
RAE1P78406 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.56■□□□□ 0.72
RAE1P78406 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.56■□□□□ 0.72
RAE1P78406 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAE1P78406 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.56■□□□□ 0.72
RAE1P78406 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAE1P78406 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.56■□□□□ 0.72
RAE1P78406 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.56■□□□□ 0.72
RAE1P78406 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.56■□□□□ 0.72
RAE1P78406 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RAE1P78406 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms