Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.13■□□□□ 0.49
UBE2NP61088 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
UBE2NP61088 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
UBE2NP61088 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.13■□□□□ 0.49
UBE2NP61088 AC068338.2-201ENST00000563278 1430 ntBASIC18.13■□□□□ 0.49
UBE2NP61088 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBE2NP61088 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2NP61088 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 AC091799.1-201ENST00000422823 811 ntBASIC18.12■□□□□ 0.49
UBE2NP61088 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2NP61088 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2NP61088 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.12■□□□□ 0.49
UBE2NP61088 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2NP61088 AL162412.1-201ENST00000567129 965 ntBASIC18.12■□□□□ 0.49
UBE2NP61088 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.12■□□□□ 0.49
UBE2NP61088 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
UBE2NP61088 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 AL024507.2-201ENST00000606070 2574 ntBASIC18.12■□□□□ 0.49
UBE2NP61088 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBE2NP61088 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.12■□□□□ 0.49
UBE2NP61088 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2NP61088 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
UBE2NP61088 CYP2T1P-201ENST00000432607 1285 ntBASIC18.11■□□□□ 0.49
UBE2NP61088 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.11■□□□□ 0.49
UBE2NP61088 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.11■□□□□ 0.49
UBE2NP61088 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
UBE2NP61088 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBE2NP61088 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.1■□□□□ 0.49
UBE2NP61088 AC007322.3-201ENST00000426526 701 ntBASIC18.1■□□□□ 0.49
UBE2NP61088 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.1■□□□□ 0.49
UBE2NP61088 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.1■□□□□ 0.49
UBE2NP61088 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.1■□□□□ 0.49
UBE2NP61088 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBE2NP61088 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBE2NP61088 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2NP61088 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
UBE2NP61088 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.09■□□□□ 0.49
UBE2NP61088 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2NP61088 AL121832.2-201ENST00000610979 668 ntBASIC18.09■□□□□ 0.49
UBE2NP61088 OR10C1-204ENST00000622521 1039 ntBASIC18.09■□□□□ 0.49
UBE2NP61088 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2NP61088 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2NP61088 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 AC116050.2-201ENST00000612102 1779 ntBASIC18.09■□□□□ 0.49
UBE2NP61088 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UBE2NP61088 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UBE2NP61088 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2NP61088 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
UBE2NP61088 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.08■□□□□ 0.49
UBE2NP61088 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.08■□□□□ 0.49
UBE2NP61088 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2NP61088 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2NP61088 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2NP61088 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UBE2NP61088 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2NP61088 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2NP61088 GPX1P1-201ENST00000388829 606 ntBASIC18.08■□□□□ 0.48
UBE2NP61088 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2NP61088 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2NP61088 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UBE2NP61088 AF201337.1-201ENST00000520239 748 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms