Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
HADHBP55084 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
HADHBP55084 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
HADHBP55084 PKD1P6-201ENST00000343738 4769 ntBASIC21.64■■□□□ 1.06
HADHBP55084 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
HADHBP55084 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
HADHBP55084 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
HADHBP55084 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.64■■□□□ 1.05
HADHBP55084 MIR2861-201ENST00000636310 90 ntBASIC21.64■■□□□ 1.05
HADHBP55084 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HADHBP55084 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
HADHBP55084 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
HADHBP55084 AC116050.2-201ENST00000612102 1779 ntBASIC21.64■■□□□ 1.05
HADHBP55084 LINC02228-203ENST00000641970 1355 ntBASIC21.63■■□□□ 1.05
HADHBP55084 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHBP55084 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
HADHBP55084 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
HADHBP55084 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
HADHBP55084 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
HADHBP55084 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.63■■□□□ 1.05
HADHBP55084 AC105265.2-201ENST00000467189 838 ntBASIC21.63■■□□□ 1.05
HADHBP55084 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L2-201ENST00000561772 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.63■■□□□ 1.05
HADHBP55084 AC005837.3-201ENST00000612163 286 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L6-201ENST00000626483 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L1-201ENST00000627662 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L8-201ENST00000629013 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L3-201ENST00000630187 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L7-201ENST00000630678 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 DUX4L5-201ENST00000630834 1275 ntBASIC21.63■■□□□ 1.05
HADHBP55084 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
HADHBP55084 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHBP55084 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
HADHBP55084 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
HADHBP55084 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HADHBP55084 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.62■■□□□ 1.05
HADHBP55084 AC123595.1-201ENST00000440769 1046 ntBASIC21.62■■□□□ 1.05
HADHBP55084 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.62■■□□□ 1.05
HADHBP55084 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HADHBP55084 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
HADHBP55084 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.62■■□□□ 1.05
HADHBP55084 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.62■■□□□ 1.05
HADHBP55084 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.62■■□□□ 1.05
HADHBP55084 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.61■■□□□ 1.05
HADHBP55084 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HADHBP55084 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.61■■□□□ 1.05
HADHBP55084 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 KRT18P20-201ENST00000548986 1279 ntBASIC21.61■■□□□ 1.05
HADHBP55084 AC104187.1-201ENST00000607510 612 ntBASIC21.61■■□□□ 1.05
HADHBP55084 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
HADHBP55084 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.61■■□□□ 1.05
HADHBP55084 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.61■■□□□ 1.05
HADHBP55084 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HADHBP55084 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.61■■□□□ 1.05
HADHBP55084 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HADHBP55084 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.61■■□□□ 1.05
HADHBP55084 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
HADHBP55084 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.6■■□□□ 1.05
HADHBP55084 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.6■■□□□ 1.05
HADHBP55084 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.6■■□□□ 1.05
HADHBP55084 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 TERF1P2-201ENST00000583350 1212 ntBASIC21.6■■□□□ 1.05
HADHBP55084 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.6■■□□□ 1.05
HADHBP55084 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.6■■□□□ 1.05
HADHBP55084 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HADHBP55084 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.6■■□□□ 1.05
HADHBP55084 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHBP55084 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.59■■□□□ 1.05
HADHBP55084 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HADHBP55084 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.59■■□□□ 1.05
HADHBP55084 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.59■■□□□ 1.05
HADHBP55084 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HADHBP55084 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HADHBP55084 SLC7A5P2-201ENST00000553010 536 ntBASIC21.59■■□□□ 1.05
HADHBP55084 CCDC92B-201ENST00000575506 885 ntBASIC21.59■■□□□ 1.05
HADHBP55084 AP001160.3-201ENST00000601484 763 ntBASIC21.59■■□□□ 1.05
HADHBP55084 AC243732.1-201ENST00000612648 864 ntBASIC21.59■■□□□ 1.05
HADHBP55084 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms