Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 BRE5YNR051C 1548 nt2.23□□□□□ -2.05
YNL040WP53960 FUS1YCL027W 1539 nt2.23□□□□□ -2.05
YNL040WP53960 ORC2YBR060C 1863 nt2.23□□□□□ -2.05
YNL040WP53960 SLU7YDR088C 1149 nt2.23□□□□□ -2.05
YNL040WP53960 YIL012WYIL012W 342 nt2.23□□□□□ -2.05
YNL040WP53960 COX3Q0275 810 nt2.23□□□□□ -2.05
YNL040WP53960 YKL165C-AYKL165C-A 234 nt2.23□□□□□ -2.05
YNL040WP53960 TPK3YKL166C 1197 nt2.23□□□□□ -2.05
YNL040WP53960 YLR217WYLR217W 324 nt2.23□□□□□ -2.05
YNL040WP53960 CWC24YLR323C 780 nt2.23□□□□□ -2.05
YNL040WP53960 COQ10YOL008W 624 nt2.23□□□□□ -2.05
YNL040WP53960 HEM4YOR278W 828 nt2.23□□□□□ -2.05
YNL040WP53960 ARL1YBR164C 552 nt2.23□□□□□ -2.05
YNL040WP53960 NTC20YBR188C 423 nt2.23□□□□□ -2.05
YNL040WP53960 YBR287WYBR287W 1284 nt2.23□□□□□ -2.05
YNL040WP53960 NOP14YDL148C 2433 nt2.23□□□□□ -2.05
YNL040WP53960 ALK2YBL009W 2031 nt2.23□□□□□ -2.05
YNL040WP53960 RLI1YDR091C 1827 nt2.23□□□□□ -2.05
YNL040WP53960 TOP2YNL088W 4287 nt2.23□□□□□ -2.05
YNL040WP53960 MAL33YBR297W 1407 nt2.23□□□□□ -2.05
YNL040WP53960 URK1YNR012W 1506 nt2.22□□□□□ -2.05
YNL040WP53960 SCH9YHR205W 2475 nt2.22□□□□□ -2.05
YNL040WP53960 SLK19YOR195W 2466 nt2.22□□□□□ -2.05
YNL040WP53960 NSE4YDL105W 1209 nt2.22□□□□□ -2.05
YNL040WP53960 RAV2YDR202C 1056 nt2.22□□□□□ -2.05
YNL040WP53960 ERG28YER044C 447 nt2.22□□□□□ -2.05
YNL040WP53960 STE2YFL026W 1296 nt2.22□□□□□ -2.05
YNL040WP53960 YJL156W-AYJL156W-A 222 nt2.22□□□□□ -2.05
YNL040WP53960 ATP7YKL016C 525 nt2.22□□□□□ -2.05
YNL040WP53960 IRC21YMR073C 606 nt2.22□□□□□ -2.05
YNL040WP53960 RRT16YNL105W 429 nt2.22□□□□□ -2.05
YNL040WP53960 SME1YOR159C 285 nt2.22□□□□□ -2.05
YNL040WP53960 RBL2YOR265W 321 nt2.22□□□□□ -2.05
YNL040WP53960 snR191snR191 274 nt2.22□□□□□ -2.05
YNL040WP53960 YDR338CYDR338C 2088 nt2.22□□□□□ -2.05
YNL040WP53960 PSK2YOL045W 3306 nt2.22□□□□□ -2.05
YNL040WP53960 NOP19YGR251W 591 nt2.21□□□□□ -2.06
YNL040WP53960 SPO11YHL022C 1197 nt2.21□□□□□ -2.06
YNL040WP53960 YLL044WYLL044W 447 nt2.21□□□□□ -2.06
YNL040WP53960 NYV1YLR093C 762 nt2.21□□□□□ -2.06
YNL040WP53960 CSI2YOL007C 1026 nt2.21□□□□□ -2.06
YNL040WP53960 RRP12YPL012W 3687 nt2.21□□□□□ -2.06
YNL040WP53960 MCD1YDL003W 1701 nt2.2□□□□□ -2.06
YNL040WP53960 snR83snR83 306 nt2.2□□□□□ -2.06
YNL040WP53960 TIF35YDR429C 825 nt2.2□□□□□ -2.06
YNL040WP53960 YPT6YLR262C 648 nt2.2□□□□□ -2.06
YNL040WP53960 ATX1YNL259C 222 nt2.2□□□□□ -2.06
YNL040WP53960 YAP7YOL028C 738 nt2.2□□□□□ -2.06
YNL040WP53960 CUR1YPR158W 759 nt2.2□□□□□ -2.06
YNL040WP53960 RXT2YBR095C 1293 nt2.2□□□□□ -2.06
YNL040WP53960 MBA1YBR185C 837 nt2.2□□□□□ -2.06
YNL040WP53960 RAD18YCR066W 1464 nt2.2□□□□□ -2.06
YNL040WP53960 SSQ1YLR369W 1974 nt2.19□□□□□ -2.06
YNL040WP53960 VPS38YLR360W 1320 nt2.19□□□□□ -2.06
YNL040WP53960 INP53YOR109W 3324 nt2.19□□□□□ -2.06
YNL040WP53960 CAJ1YER048C 1176 nt2.19□□□□□ -2.06
YNL040WP53960 RPS1AYLR441C 768 nt2.19□□□□□ -2.06
YNL040WP53960 YNL050CYNL050C 813 nt2.19□□□□□ -2.06
YNL040WP53960 FPR1YNL135C 345 nt2.19□□□□□ -2.06
YNL040WP53960 CRS5YOR031W 210 nt2.19□□□□□ -2.06
YNL040WP53960 COG3YER157W 2406 nt2.19□□□□□ -2.06
YNL040WP53960 RLF2YPR018W 1821 nt2.19□□□□□ -2.06
YNL040WP53960 SWA2YDR320C 2007 nt2.18□□□□□ -2.06
YNL040WP53960 AMS1YGL156W 3252 nt2.18□□□□□ -2.06
YNL040WP53960 BRE1YDL074C 2103 nt2.18□□□□□ -2.06
YNL040WP53960 NEL1YHR035W 1893 nt2.18□□□□□ -2.06
YNL040WP53960 BAS1YKR099W 2436 nt2.18□□□□□ -2.06
YNL040WP53960 snR76snR76 109 nt2.18□□□□□ -2.06
YNL040WP53960 SNA4YDL123W 423 nt2.18□□□□□ -2.06
YNL040WP53960 YDR262WYDR262W 819 nt2.18□□□□□ -2.06
YNL040WP53960 LOC1YFR001W 615 nt2.18□□□□□ -2.06
YNL040WP53960 YMR31YFR049W 372 nt2.18□□□□□ -2.06
YNL040WP53960 RPL11BYGR085C 525 nt2.18□□□□□ -2.06
YNL040WP53960 YGR115CYGR115C 780 nt2.18□□□□□ -2.06
YNL040WP53960 OTU2YHL013C 924 nt2.18□□□□□ -2.06
YNL040WP53960 RPS22BYLR367W 393 nt2.18□□□□□ -2.06
YNL040WP53960 RSA1YPL193W 1146 nt2.18□□□□□ -2.06
YNL040WP53960 RPL11AYPR102C 525 nt2.18□□□□□ -2.06
YNL040WP53960 EDS1YBR033W 2760 nt2.18□□□□□ -2.06
YNL040WP53960 HRD3YLR207W 2502 nt2.18□□□□□ -2.06
YNL040WP53960 ALY1YKR021W 2748 nt2.18□□□□□ -2.06
YNL040WP53960 SPP41YDR464W 4308 nt2.18□□□□□ -2.06
YNL040WP53960 CDC37YDR168W 1521 nt2.17□□□□□ -2.06
YNL040WP53960 YDR203WYDR203W 318 nt2.17□□□□□ -2.06
YNL040WP53960 YER189WYER189W 369 nt2.17□□□□□ -2.06
YNL040WP53960 BRP1YGL007W 378 nt2.17□□□□□ -2.06
YNL040WP53960 LIN1YHR156C 1023 nt2.17□□□□□ -2.06
YNL040WP53960 CAP1YKL007W 807 nt2.17□□□□□ -2.06
YNL040WP53960 ESF2YNR054C 951 nt2.17□□□□□ -2.06
YNL040WP53960 BRX1YOL077C 876 nt2.17□□□□□ -2.06
YNL040WP53960 YRO2YBR054W 1035 nt2.17□□□□□ -2.06
YNL040WP53960 MF(ALPHA)1YPL187W 498 nt2.17□□□□□ -2.06
YNL040WP53960 ATP20YPR020W 348 nt2.17□□□□□ -2.06
YNL040WP53960 UBP1YDL122W 2430 nt2.17□□□□□ -2.06
YNL040WP53960 KAP123YER110C 3342 nt2.16□□□□□ -2.06
YNL040WP53960 YFL012WYFL012W 447 nt2.16□□□□□ -2.06
YNL040WP53960 THG1YGR024C 714 nt2.16□□□□□ -2.06
YNL040WP53960 RTS3YGR161C 792 nt2.16□□□□□ -2.06
YNL040WP53960 YGR283CYGR283C 1026 nt2.16□□□□□ -2.06
YNL040WP53960 YPT52YKR014C 705 nt2.16□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms