Protein–RNA interactions for Protein: P53867

ATG4, Cysteine protease ATG4, yeastyeast

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG4P53867 RSF2YJR127C 4143 nt3.22□□□□□ -1.89
ATG4P53867 YKL222CYKL222C 2118 nt3.22□□□□□ -1.89
ATG4P53867 YCR081C-AYCR081C-A 237 nt3.22□□□□□ -1.89
ATG4P53867 RTT105YER104W 627 nt3.22□□□□□ -1.89
ATG4P53867 RPS26BYER131W 360 nt3.22□□□□□ -1.89
ATG4P53867 YGR025WYGR025W 303 nt3.22□□□□□ -1.89
ATG4P53867 LAG1YHL003C 1236 nt3.22□□□□□ -1.89
ATG4P53867 LSM2YBL026W 288 nt3.22□□□□□ -1.89
ATG4P53867 VTI1YMR197C 654 nt3.22□□□□□ -1.89
ATG4P53867 URA10YMR271C 684 nt3.22□□□□□ -1.89
ATG4P53867 YMR316C-AYMR316C-A 312 nt3.22□□□□□ -1.89
ATG4P53867 PFY1YOR122C 381 nt3.22□□□□□ -1.89
ATG4P53867 YOR385WYOR385W 873 nt3.22□□□□□ -1.89
ATG4P53867 YPL039WYPL039W 951 nt3.22□□□□□ -1.89
ATG4P53867 FRE8YLR047C 2061 nt3.22□□□□□ -1.89
ATG4P53867 SPT10YJL127C 1923 nt3.22□□□□□ -1.89
ATG4P53867 ETP1YHL010C 1758 nt3.22□□□□□ -1.89
ATG4P53867 BYE1YKL005C 1785 nt3.22□□□□□ -1.89
ATG4P53867 EMP70YLR083C 2004 nt3.22□□□□□ -1.89
ATG4P53867 CWH41YGL027C 2502 nt3.22□□□□□ -1.89
ATG4P53867 OST1YJL002C 1431 nt3.21□□□□□ -1.9
ATG4P53867 snR65snR65 100 nt3.21□□□□□ -1.9
ATG4P53867 HSP10YOR020C 321 nt3.21□□□□□ -1.9
ATG4P53867 SWT1YOR166C 1377 nt3.21□□□□□ -1.9
ATG4P53867 NIC96YFR002W 2520 nt3.21□□□□□ -1.9
ATG4P53867 MPS1YDL028C 2295 nt3.21□□□□□ -1.9
ATG4P53867 MKT1YNL085W 2493 nt3.2□□□□□ -1.9
ATG4P53867 HMRA2YCR096C 360 nt3.2□□□□□ -1.9
ATG4P53867 YDL068WYDL068W 330 nt3.2□□□□□ -1.9
ATG4P53867 SMT3YDR510W 306 nt3.2□□□□□ -1.9
ATG4P53867 snR13snR13 124 nt3.2□□□□□ -1.9
ATG4P53867 SLA1YBL007C 3735 nt3.2□□□□□ -1.9
ATG4P53867 SWI1YPL016W 3945 nt3.19□□□□□ -1.9
ATG4P53867 SEC15YGL233W 2733 nt3.19□□□□□ -1.9
ATG4P53867 snR8snR8 190 nt3.19□□□□□ -1.9
ATG4P53867 STE14YDR410C 720 nt3.19□□□□□ -1.9
ATG4P53867 AIM11YER093C-A 414 nt3.19□□□□□ -1.9
ATG4P53867 MTC3YGL226W 372 nt3.19□□□□□ -1.9
ATG4P53867 TVP18YMR071C 504 nt3.19□□□□□ -1.9
ATG4P53867 LDS2YOL047C 1071 nt3.19□□□□□ -1.9
ATG4P53867 RED1YLR263W 2484 nt3.19□□□□□ -1.9
ATG4P53867 SQS1YNL224C 2304 nt3.19□□□□□ -1.9
ATG4P53867 NSP1YJL041W 2472 nt3.18□□□□□ -1.9
ATG4P53867 YGL140CYGL140C 3660 nt3.18□□□□□ -1.9
ATG4P53867 SWH1YAR042W 3567 nt3.18□□□□□ -1.9
ATG4P53867 TOP1YOL006C 2310 nt3.18□□□□□ -1.9
ATG4P53867 YDR193WYDR193W 399 nt3.18□□□□□ -1.9
ATG4P53867 YDR464C-AYDR464C-A 189 nt3.18□□□□□ -1.9
ATG4P53867 YGR051CYGR051C 324 nt3.18□□□□□ -1.9
ATG4P53867 YHR214W-AYHR214W-A 486 nt3.18□□□□□ -1.9
ATG4P53867 TMA19YKL056C 504 nt3.18□□□□□ -1.9
ATG4P53867 RPL15AYLR029C 615 nt3.18□□□□□ -1.9
ATG4P53867 PAU23YLR037C 375 nt3.18□□□□□ -1.9
ATG4P53867 YAR068WYAR068W 486 nt3.18□□□□□ -1.9
ATG4P53867 RPL23AYBL087C 414 nt3.18□□□□□ -1.9
ATG4P53867 YBL108WYBL108W 306 nt3.18□□□□□ -1.9
ATG4P53867 DGK1YOR311C 873 nt3.18□□□□□ -1.9
ATG4P53867 YPL080CYPL080C 327 nt3.18□□□□□ -1.9
ATG4P53867 CCM1YGR150C 2595 nt3.18□□□□□ -1.9
ATG4P53867 GCD10YNL062C 1437 nt3.18□□□□□ -1.9
ATG4P53867 MAK5YBR142W 2322 nt3.18□□□□□ -1.9
ATG4P53867 DIE2YGR227W 1578 nt3.17□□□□□ -1.9
ATG4P53867 YJR003CYJR003C 1560 nt3.17□□□□□ -1.9
ATG4P53867 ALY1YKR021W 2748 nt3.17□□□□□ -1.9
ATG4P53867 AAD16YFL057C 459 nt3.17□□□□□ -1.9
ATG4P53867 RPL22AYLR061W 366 nt3.17□□□□□ -1.9
ATG4P53867 ATP3YBR039W 936 nt3.17□□□□□ -1.9
ATG4P53867 YPR010C-AYPR010C-A 219 nt3.17□□□□□ -1.9
ATG4P53867 ECM16YMR128W 3804 nt3.17□□□□□ -1.9
ATG4P53867 MUS81YDR386W 1899 nt3.16□□□□□ -1.9
ATG4P53867 RPL29YFR032C-A 180 nt3.16□□□□□ -1.9
ATG4P53867 YIL012WYIL012W 342 nt3.16□□□□□ -1.9
ATG4P53867 PET191YJR034W 327 nt3.16□□□□□ -1.9
ATG4P53867 YAR029WYAR029W 225 nt3.16□□□□□ -1.9
ATG4P53867 HHF1YBR009C 312 nt3.16□□□□□ -1.9
ATG4P53867 YOR146WYOR146W 306 nt3.16□□□□□ -1.9
ATG4P53867 YGR237CYGR237C 2358 nt3.16□□□□□ -1.9
ATG4P53867 ARG2YJL071W 1725 nt3.16□□□□□ -1.9
ATG4P53867 MED1YPR070W 1701 nt3.16□□□□□ -1.9
ATG4P53867 ELM1YKL048C 1923 nt3.15□□□□□ -1.9
ATG4P53867 MSD1YPL104W 1977 nt3.15□□□□□ -1.91
ATG4P53867 tC(GCA)BtC(GCA)B 72 nt3.15□□□□□ -1.91
ATG4P53867 tC(GCA)GtC(GCA)G 72 nt3.15□□□□□ -1.91
ATG4P53867 tC(GCA)P1tC(GCA)P1 72 nt3.15□□□□□ -1.91
ATG4P53867 tC(GCA)P2tC(GCA)P2 72 nt3.15□□□□□ -1.91
ATG4P53867 YFL032WYFL032W 321 nt3.15□□□□□ -1.91
ATG4P53867 RAD6YGL058W 519 nt3.15□□□□□ -1.91
ATG4P53867 RPL1BYGL135W 654 nt3.15□□□□□ -1.91
ATG4P53867 LSM1YJL124C 519 nt3.15□□□□□ -1.91
ATG4P53867 MCM22YJR135C 720 nt3.15□□□□□ -1.91
ATG4P53867 SRL3YKR091W 741 nt3.15□□□□□ -1.91
ATG4P53867 IMP4YNL075W 873 nt3.15□□□□□ -1.91
ATG4P53867 TIM18YOR297C 579 nt3.15□□□□□ -1.91
ATG4P53867 RPL1AYPL220W 654 nt3.15□□□□□ -1.91
ATG4P53867 ATG21YPL100W 1491 nt3.15□□□□□ -1.91
ATG4P53867 RRN6YBL014C 2685 nt3.15□□□□□ -1.91
ATG4P53867 SPT6YGR116W 4356 nt3.14□□□□□ -1.91
ATG4P53867 YDR102CYDR102C 333 nt3.14□□□□□ -1.91
ATG4P53867 YEL018C-AYEL018C-A 534 nt3.14□□□□□ -1.91
ATG4P53867 YEL057CYEL057C 702 nt3.14□□□□□ -1.91
Retrieved 100 of 7,029 protein–RNA pairs in 21.9 ms