Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 PCK1YKR097W 1650 nt1.99□□□□□ -2.09
SSU72P53538 SLK19YOR195W 2466 nt1.99□□□□□ -2.09
SSU72P53538 SAE2YGL175C 1038 nt1.99□□□□□ -2.09
SSU72P53538 YHR032W-AYHR032W-A 180 nt1.99□□□□□ -2.09
SSU72P53538 YLR257WYLR257W 966 nt1.99□□□□□ -2.09
SSU72P53538 GIM5YML094W 492 nt1.99□□□□□ -2.09
SSU72P53538 YOL019W-AYOL019W-A 153 nt1.99□□□□□ -2.09
SSU72P53538 NGL1YOL042W 1092 nt1.99□□□□□ -2.09
SSU72P53538 YPL276WYPL276W 438 nt1.99□□□□□ -2.09
SSU72P53538 ATP20YPR020W 348 nt1.99□□□□□ -2.09
SSU72P53538 POP7YBR167C 423 nt1.99□□□□□ -2.09
SSU72P53538 RAD18YCR066W 1464 nt1.99□□□□□ -2.09
SSU72P53538 NPR3YHL023C 3441 nt1.98□□□□□ -2.09
SSU72P53538 SAP185YJL098W 3177 nt1.98□□□□□ -2.09
SSU72P53538 SSD1YDR293C 3753 nt1.98□□□□□ -2.09
SSU72P53538 tC(GCA)BtC(GCA)B 72 nt1.98□□□□□ -2.09
SSU72P53538 tC(GCA)GtC(GCA)G 72 nt1.98□□□□□ -2.09
SSU72P53538 tC(GCA)P1tC(GCA)P1 72 nt1.98□□□□□ -2.09
SSU72P53538 tC(GCA)P2tC(GCA)P2 72 nt1.98□□□□□ -2.09
SSU72P53538 RPL27BYDR471W 411 nt1.98□□□□□ -2.09
SSU72P53538 LOC1YFR001W 615 nt1.98□□□□□ -2.09
SSU72P53538 YGL109WYGL109W 324 nt1.98□□□□□ -2.09
SSU72P53538 THG1YGR024C 714 nt1.98□□□□□ -2.09
SSU72P53538 RPL11BYGR085C 525 nt1.98□□□□□ -2.09
SSU72P53538 LIN1YHR156C 1023 nt1.98□□□□□ -2.09
SSU72P53538 PRE8YML092C 753 nt1.98□□□□□ -2.09
SSU72P53538 ATX1YNL259C 222 nt1.98□□□□□ -2.09
SSU72P53538 BRX1YOL077C 876 nt1.98□□□□□ -2.09
SSU72P53538 RPL11AYPR102C 525 nt1.98□□□□□ -2.09
SSU72P53538 NUP170YBL079W 4509 nt1.98□□□□□ -2.09
SSU72P53538 OSW7YFR039C 1533 nt1.97□□□□□ -2.09
SSU72P53538 SRB4YER022W 2064 nt1.97□□□□□ -2.09
SSU72P53538 JIP5YPR169W 1479 nt1.97□□□□□ -2.09
SSU72P53538 YCR064CYCR064C 411 nt1.97□□□□□ -2.09
SSU72P53538 snR70snR70 164 nt1.97□□□□□ -2.09
SSU72P53538 YDR262WYDR262W 819 nt1.97□□□□□ -2.09
SSU72P53538 ERG28YER044C 447 nt1.97□□□□□ -2.09
SSU72P53538 YFL012WYFL012W 447 nt1.97□□□□□ -2.09
SSU72P53538 MRM2YGL136C 963 nt1.97□□□□□ -2.09
SSU72P53538 TAD1YGL243W 1203 nt1.97□□□□□ -2.09
SSU72P53538 RTS3YGR161C 792 nt1.97□□□□□ -2.09
SSU72P53538 EMC6YLL014W 327 nt1.97□□□□□ -2.09
SSU72P53538 YLL044WYLL044W 447 nt1.97□□□□□ -2.09
SSU72P53538 RPL16BYNL069C 597 nt1.97□□□□□ -2.09
SSU72P53538 CSI2YOL007C 1026 nt1.97□□□□□ -2.09
SSU72P53538 CUR1YPR158W 759 nt1.97□□□□□ -2.09
SSU72P53538 NTC20YBR188C 423 nt1.97□□□□□ -2.09
SSU72P53538 MSL5YLR116W 1431 nt1.97□□□□□ -2.09
SSU72P53538 GCN2YDR283C 4980 nt1.97□□□□□ -2.09
SSU72P53538 LST4YKL176C 2487 nt1.97□□□□□ -2.09
SSU72P53538 ASI3YNL008C 2031 nt1.96□□□□□ -2.09
SSU72P53538 KEI1YDR367W 666 nt1.96□□□□□ -2.1
SSU72P53538 RSM28YDR494W 1086 nt1.96□□□□□ -2.1
SSU72P53538 YHR071C-AYHR071C-A 321 nt1.96□□□□□ -2.1
SSU72P53538 YJL133C-AYJL133C-A 225 nt1.96□□□□□ -2.1
SSU72P53538 PAI3YMR174C 207 nt1.96□□□□□ -2.1
SSU72P53538 YPL119C-AYPL119C-A 264 nt1.96□□□□□ -2.1
SSU72P53538 SEC66YBR171W 621 nt1.96□□□□□ -2.1
SSU72P53538 YBR209WYBR209W 318 nt1.96□□□□□ -2.1
SSU72P53538 PHO91YNR013C 2685 nt1.96□□□□□ -2.1
SSU72P53538 AGC1YPR021C 2709 nt1.96□□□□□ -2.1
SSU72P53538 NEO1YIL048W 3456 nt1.95□□□□□ -2.1
SSU72P53538 GPM2YDL021W 936 nt1.95□□□□□ -2.1
SSU72P53538 snR76snR76 109 nt1.95□□□□□ -2.1
SSU72P53538 PCL5YHR071W 690 nt1.95□□□□□ -2.1
SSU72P53538 CAP1YKL007W 807 nt1.95□□□□□ -2.1
SSU72P53538 YPT52YKR014C 705 nt1.95□□□□□ -2.1
SSU72P53538 RNP1YLL046C 750 nt1.95□□□□□ -2.1
SSU72P53538 YNL050CYNL050C 813 nt1.95□□□□□ -2.1
SSU72P53538 ALG14YBR070C 714 nt1.95□□□□□ -2.1
SSU72P53538 SUS1YBR111W-A 291 nt1.95□□□□□ -2.1
SSU72P53538 GIP3YPL137C 3831 nt1.94□□□□□ -2.1
SSU72P53538 YCR013CYCR013C 648 nt1.94□□□□□ -2.1
SSU72P53538 SNA4YDL123W 423 nt1.94□□□□□ -2.1
SSU72P53538 YDR248CYDR248C 582 nt1.94□□□□□ -2.1
SSU72P53538 RPS17BYDR447C 411 nt1.94□□□□□ -2.1
SSU72P53538 SDC1YDR469W 528 nt1.94□□□□□ -2.1
SSU72P53538 MIC19YFR011C 513 nt1.94□□□□□ -2.1
SSU72P53538 PGD1YGL025C 1194 nt1.94□□□□□ -2.1
SSU72P53538 YPS5YGL259W 498 nt1.94□□□□□ -2.1
SSU72P53538 YKR051WYKR051W 1257 nt1.94□□□□□ -2.1
SSU72P53538 PAU23YLR037C 375 nt1.94□□□□□ -2.1
SSU72P53538 NYV1YLR093C 762 nt1.94□□□□□ -2.1
SSU72P53538 FUS1YCL027W 1539 nt1.94□□□□□ -2.1
SSU72P53538 YDR338CYDR338C 2088 nt1.94□□□□□ -2.1
SSU72P53538 ATG9YDL149W 2994 nt1.93□□□□□ -2.1
SSU72P53538 INP53YOR109W 3324 nt1.93□□□□□ -2.1
SSU72P53538 MAL33YBR297W 1407 nt1.93□□□□□ -2.1
SSU72P53538 STI1YOR027W 1770 nt1.93□□□□□ -2.1
SSU72P53538 YER107W-AYER107W-A 321 nt1.93□□□□□ -2.1
SSU72P53538 YIL156W-BYIL156W-B 222 nt1.93□□□□□ -2.1
SSU72P53538 RMP1YLR145W 606 nt1.93□□□□□ -2.1
SSU72P53538 ECI1YLR284C 843 nt1.93□□□□□ -2.1
SSU72P53538 NBP1YLR457C 960 nt1.93□□□□□ -2.1
SSU72P53538 AIM32YML050W 936 nt1.93□□□□□ -2.1
SSU72P53538 RGM1YMR182C 636 nt1.93□□□□□ -2.1
SSU72P53538 YEL043WYEL043W 2871 nt1.93□□□□□ -2.1
SSU72P53538 CLN3YAL040C 1743 nt1.93□□□□□ -2.1
SSU72P53538 STE11YLR362W 2154 nt1.93□□□□□ -2.1
SSU72P53538 ELG1YOR144C 2376 nt1.92□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms