Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AC007322.1-201ENST00000426983 750 ntBASIC19.25■□□□□ 0.67
SMSP52788 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.25■□□□□ 0.67
SMSP52788 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.25■□□□□ 0.67
SMSP52788 MFSD11-216ENST00000590393 1141 ntBASIC19.25■□□□□ 0.67
SMSP52788 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.25■□□□□ 0.67
SMSP52788 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.25■□□□□ 0.67
SMSP52788 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.25■□□□□ 0.67
SMSP52788 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.25■□□□□ 0.67
SMSP52788 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 AC009237.3-201ENST00000393279 1427 ntBASIC19.25■□□□□ 0.67
SMSP52788 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMSP52788 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMSP52788 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.25■□□□□ 0.67
SMSP52788 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SMSP52788 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.24■□□□□ 0.67
SMSP52788 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMSP52788 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SMSP52788 AC083906.2-201ENST00000511578 360 ntBASIC19.24■□□□□ 0.67
SMSP52788 AC142086.2-201ENST00000569753 217 ntBASIC19.24■□□□□ 0.67
SMSP52788 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SMSP52788 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMSP52788 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.24■□□□□ 0.67
SMSP52788 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMSP52788 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 SLC29A4P1-201ENST00000398760 971 ntBASIC19.23■□□□□ 0.67
SMSP52788 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.23■□□□□ 0.67
SMSP52788 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 AC104187.1-201ENST00000607510 612 ntBASIC19.23■□□□□ 0.67
SMSP52788 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.23■□□□□ 0.67
SMSP52788 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.23■□□□□ 0.67
SMSP52788 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.23■□□□□ 0.67
SMSP52788 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMSP52788 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.22■□□□□ 0.67
SMSP52788 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SMSP52788 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.22■□□□□ 0.67
SMSP52788 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.22■□□□□ 0.67
SMSP52788 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.22■□□□□ 0.67
SMSP52788 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
SMSP52788 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMSP52788 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.21■□□□□ 0.67
SMSP52788 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.21■□□□□ 0.67
SMSP52788 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.21■□□□□ 0.67
SMSP52788 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.21■□□□□ 0.67
SMSP52788 AC005181.1-201ENST00000604782 1256 ntBASIC19.21■□□□□ 0.67
SMSP52788 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.21■□□□□ 0.67
SMSP52788 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.21■□□□□ 0.67
SMSP52788 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMSP52788 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMSP52788 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SMSP52788 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.21■□□□□ 0.67
SMSP52788 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SMSP52788 LINC01006-201ENST00000333319 2292 ntBASIC19.21■□□□□ 0.67
SMSP52788 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms