Protein–RNA interactions for Protein: P48449

LSS, Lanosterol synthase, humanhuman

Predictions only

Length 732 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSSP48449 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.05■□□□□ 0.8
LSSP48449 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.05■□□□□ 0.8
LSSP48449 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LSSP48449 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.05■□□□□ 0.8
LSSP48449 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LSSP48449 AC073648.6-201ENST00000641589 218 ntBASIC20.05■□□□□ 0.8
LSSP48449 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSSP48449 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSSP48449 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSSP48449 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LSSP48449 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.05■□□□□ 0.8
LSSP48449 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.05■□□□□ 0.8
LSSP48449 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.04■□□□□ 0.8
LSSP48449 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.04■□□□□ 0.8
LSSP48449 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.04■□□□□ 0.8
LSSP48449 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.04■□□□□ 0.8
LSSP48449 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.04■□□□□ 0.8
LSSP48449 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LSSP48449 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LSSP48449 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LSSP48449 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.03■□□□□ 0.8
LSSP48449 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
LSSP48449 AC091799.1-201ENST00000422823 811 ntBASIC20.03■□□□□ 0.8
LSSP48449 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.03■□□□□ 0.8
LSSP48449 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.03■□□□□ 0.8
LSSP48449 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LSSP48449 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.03■□□□□ 0.8
LSSP48449 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 AC244015.2-201ENST00000616358 1861 ntBASIC20.03■□□□□ 0.8
LSSP48449 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LSSP48449 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSSP48449 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSSP48449 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
LSSP48449 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
LSSP48449 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 UBE2SP1-201ENST00000450587 669 ntBASIC20.02■□□□□ 0.8
LSSP48449 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.02■□□□□ 0.8
LSSP48449 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
LSSP48449 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.02■□□□□ 0.8
LSSP48449 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.02■□□□□ 0.8
LSSP48449 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LSSP48449 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSSP48449 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LSSP48449 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LSSP48449 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LSSP48449 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
LSSP48449 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LSSP48449 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LSSP48449 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.01■□□□□ 0.79
LSSP48449 AC245052.3-201ENST00000450182 901 ntBASIC20.01■□□□□ 0.79
LSSP48449 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 AC008550.1-201ENST00000511500 884 ntBASIC20.01■□□□□ 0.79
LSSP48449 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LSSP48449 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LSSP48449 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.01■□□□□ 0.79
LSSP48449 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LSSP48449 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LSSP48449 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20■□□□□ 0.79
LSSP48449 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LSSP48449 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20■□□□□ 0.79
LSSP48449 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LSSP48449 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20■□□□□ 0.79
LSSP48449 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LSSP48449 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LSSP48449 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms