Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.66■□□□□ 0.74
SSR2P43308 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 AC011484.1-201ENST00000377652 1995 ntBASIC19.66■□□□□ 0.74
SSR2P43308 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR2P43308 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.66■□□□□ 0.74
SSR2P43308 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR2P43308 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SSR2P43308 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
SSR2P43308 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR2P43308 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SSR2P43308 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR2P43308 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR2P43308 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR2P43308 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR2P43308 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.64■□□□□ 0.73
SSR2P43308 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.64■□□□□ 0.73
SSR2P43308 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR2P43308 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.64■□□□□ 0.73
SSR2P43308 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
SSR2P43308 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR2P43308 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SSR2P43308 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
SSR2P43308 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR2P43308 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR2P43308 AC116050.2-201ENST00000612102 1779 ntBASIC19.64■□□□□ 0.73
SSR2P43308 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SSR2P43308 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR2P43308 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SSR2P43308 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR2P43308 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SSR2P43308 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.63■□□□□ 0.73
SSR2P43308 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 AC091799.1-201ENST00000422823 811 ntBASIC19.63■□□□□ 0.73
SSR2P43308 AC006015.1-201ENST00000429970 570 ntBASIC19.63■□□□□ 0.73
SSR2P43308 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.63■□□□□ 0.73
SSR2P43308 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR2P43308 MFSD11-216ENST00000590393 1141 ntBASIC19.63■□□□□ 0.73
SSR2P43308 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR2P43308 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SSR2P43308 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SSR2P43308 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
SSR2P43308 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSR2P43308 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
SSR2P43308 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.62■□□□□ 0.73
SSR2P43308 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 TERF1P5-201ENST00000477545 1207 ntBASIC19.62■□□□□ 0.73
SSR2P43308 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.62■□□□□ 0.73
SSR2P43308 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR2P43308 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
SSR2P43308 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSR2P43308 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR2P43308 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSR2P43308 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SSR2P43308 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SSR2P43308 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR2P43308 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms