Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
GRIA1P42261 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.92■□□□□ 0.94
GRIA1P42261 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.92■□□□□ 0.94
GRIA1P42261 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.92■□□□□ 0.94
GRIA1P42261 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 PCDHAC2-203ENST00000615316 3011 ntBASIC20.92■□□□□ 0.94
GRIA1P42261 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.92■□□□□ 0.94
GRIA1P42261 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GRIA1P42261 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.91■□□□□ 0.94
GRIA1P42261 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.91■□□□□ 0.94
GRIA1P42261 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
GRIA1P42261 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GRIA1P42261 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
GRIA1P42261 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.91■□□□□ 0.94
GRIA1P42261 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.91■□□□□ 0.94
GRIA1P42261 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.9■□□□□ 0.94
GRIA1P42261 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GRIA1P42261 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GRIA1P42261 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.9■□□□□ 0.94
GRIA1P42261 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.9■□□□□ 0.94
GRIA1P42261 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GRIA1P42261 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GRIA1P42261 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GRIA1P42261 AC020907.5-201ENST00000624372 1936 ntBASIC20.9■□□□□ 0.94
GRIA1P42261 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.9■□□□□ 0.94
GRIA1P42261 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GRIA1P42261 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
GRIA1P42261 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.89■□□□□ 0.94
GRIA1P42261 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.89■□□□□ 0.94
GRIA1P42261 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GRIA1P42261 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.89■□□□□ 0.93
GRIA1P42261 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
GRIA1P42261 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.89■□□□□ 0.93
GRIA1P42261 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.89■□□□□ 0.93
GRIA1P42261 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.89■□□□□ 0.93
GRIA1P42261 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
GRIA1P42261 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.89■□□□□ 0.93
GRIA1P42261 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
GRIA1P42261 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GRIA1P42261 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
GRIA1P42261 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.88■□□□□ 0.93
GRIA1P42261 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.88■□□□□ 0.93
GRIA1P42261 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.88■□□□□ 0.93
GRIA1P42261 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
GRIA1P42261 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GRIA1P42261 AC245052.3-201ENST00000450182 901 ntBASIC20.88■□□□□ 0.93
GRIA1P42261 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 AC120498.10-201ENST00000621827 505 ntBASIC20.88■□□□□ 0.93
GRIA1P42261 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.88■□□□□ 0.93
GRIA1P42261 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GRIA1P42261 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.87■□□□□ 0.93
GRIA1P42261 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
GRIA1P42261 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.87■□□□□ 0.93
GRIA1P42261 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.87■□□□□ 0.93
GRIA1P42261 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GRIA1P42261 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.87■□□□□ 0.93
GRIA1P42261 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.87■□□□□ 0.93
GRIA1P42261 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GRIA1P42261 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GRIA1P42261 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
GRIA1P42261 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.86■□□□□ 0.93
GRIA1P42261 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms