Protein–RNA interactions for Protein: P39940

RSP5, E3 ubiquitin-protein ligase RSP5, yeastyeast

Known RBP Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RSP5P39940 CRG1YHR209W 876 nt3.58□□□□□ -1.84
RSP5P39940 YJR079WYJR079W 330 nt3.58□□□□□ -1.84
RSP5P39940 YMR193C-AYMR193C-A 387 nt3.58□□□□□ -1.84
RSP5P39940 RFC3YNL290W 1023 nt3.58□□□□□ -1.84
RSP5P39940 YOR199WYOR199W 330 nt3.58□□□□□ -1.84
RSP5P39940 YPR016W-AYPR016W-A 261 nt3.58□□□□□ -1.84
RSP5P39940 POM152YMR129W 4014 nt3.58□□□□□ -1.84
RSP5P39940 RNH70YGR276C 1662 nt3.58□□□□□ -1.84
RSP5P39940 MDM32YOR147W 1869 nt3.58□□□□□ -1.84
RSP5P39940 DIA2YOR080W 2199 nt3.58□□□□□ -1.84
RSP5P39940 XRS2YDR369C 2565 nt3.57□□□□□ -1.84
RSP5P39940 YDR431WYDR431W 312 nt3.57□□□□□ -1.84
RSP5P39940 YHR214W-AYHR214W-A 486 nt3.57□□□□□ -1.84
RSP5P39940 YJR023CYJR023C 402 nt3.57□□□□□ -1.84
RSP5P39940 ELM1YKL048C 1923 nt3.57□□□□□ -1.84
RSP5P39940 YKL162C-AYKL162C-A 153 nt3.57□□□□□ -1.84
RSP5P39940 YAR068WYAR068W 486 nt3.57□□□□□ -1.84
RSP5P39940 TOM70YNL121C 1854 nt3.57□□□□□ -1.84
RSP5P39940 RPL20BYOR312C 519 nt3.57□□□□□ -1.84
RSP5P39940 NOG1YPL093W 1944 nt3.57□□□□□ -1.84
RSP5P39940 PDC2YDR081C 2778 nt3.57□□□□□ -1.84
RSP5P39940 YKL100CYKL100C 1764 nt3.56□□□□□ -1.84
RSP5P39940 NUP60YAR002W 1620 nt3.56□□□□□ -1.84
RSP5P39940 YDR090CYDR090C 933 nt3.56□□□□□ -1.84
RSP5P39940 YER068C-AYER068C-A 432 nt3.56□□□□□ -1.84
RSP5P39940 HIT1YJR055W 495 nt3.56□□□□□ -1.84
RSP5P39940 BSC3YLR465C 309 nt3.56□□□□□ -1.84
RSP5P39940 YNL043CYNL043C 321 nt3.56□□□□□ -1.84
RSP5P39940 SWM2YNR004W 441 nt3.56□□□□□ -1.84
RSP5P39940 NSL1YPL233W 651 nt3.56□□□□□ -1.84
RSP5P39940 YPR014CYPR014C 330 nt3.56□□□□□ -1.84
RSP5P39940 SLM6YBR266C 453 nt3.56□□□□□ -1.84
RSP5P39940 NPR1YNL183C 2373 nt3.56□□□□□ -1.84
RSP5P39940 PRP22YER013W 3438 nt3.56□□□□□ -1.84
RSP5P39940 EXO84YBR102C 2262 nt3.56□□□□□ -1.84
RSP5P39940 PES4YFR023W 1836 nt3.56□□□□□ -1.84
RSP5P39940 YDL242WYDL242W 354 nt3.55□□□□□ -1.84
RSP5P39940 IRC4YDR540C 540 nt3.55□□□□□ -1.84
RSP5P39940 YHL006W-AYHL006W-A 354 nt3.55□□□□□ -1.84
RSP5P39940 CDC33YOL139C 642 nt3.55□□□□□ -1.84
RSP5P39940 SLA1YBL007C 3735 nt3.55□□□□□ -1.84
RSP5P39940 YLR352WYLR352W 2424 nt3.55□□□□□ -1.84
RSP5P39940 TAF2YCR042C 4224 nt3.55□□□□□ -1.84
RSP5P39940 BOI1YBL085W 2943 nt3.55□□□□□ -1.84
RSP5P39940 RIX1YHR197W 2292 nt3.55□□□□□ -1.84
RSP5P39940 MRPL11YDL202W 750 nt3.54□□□□□ -1.84
RSP5P39940 ATP17YDR377W 306 nt3.54□□□□□ -1.84
RSP5P39940 YGL074CYGL074C 327 nt3.54□□□□□ -1.84
RSP5P39940 CHA4YLR098C 1947 nt3.54□□□□□ -1.84
RSP5P39940 FUS1YCL027W 1539 nt3.54□□□□□ -1.84
RSP5P39940 OSH3YHR073W 2991 nt3.54□□□□□ -1.84
RSP5P39940 MRH1YDR033W 963 nt3.53□□□□□ -1.84
RSP5P39940 YEL018C-AYEL018C-A 534 nt3.53□□□□□ -1.84
RSP5P39940 PXR1YGR280C 816 nt3.53□□□□□ -1.84
RSP5P39940 IGO2YHR132W-A 396 nt3.53□□□□□ -1.84
RSP5P39940 YMR294W-AYMR294W-A 360 nt3.53□□□□□ -1.84
RSP5P39940 ERP4YOR016C 624 nt3.53□□□□□ -1.84
RSP5P39940 YPR197CYPR197C 564 nt3.53□□□□□ -1.84
RSP5P39940 FAR1YJL157C 2493 nt3.53□□□□□ -1.84
RSP5P39940 IOC3YFR013W 2364 nt3.53□□□□□ -1.84
RSP5P39940 ROY1YMR258C 1662 nt3.52□□□□□ -1.85
RSP5P39940 NSP1YJL041W 2472 nt3.52□□□□□ -1.85
RSP5P39940 NDT80YHR124W 1884 nt3.52□□□□□ -1.85
RSP5P39940 MET10YFR030W 3108 nt3.52□□□□□ -1.85
RSP5P39940 YMR31YFR049W 372 nt3.52□□□□□ -1.85
RSP5P39940 ZEO1YOL109W 342 nt3.52□□□□□ -1.85
RSP5P39940 YPL185WYPL185W 396 nt3.52□□□□□ -1.85
RSP5P39940 MED1YPR070W 1701 nt3.52□□□□□ -1.85
RSP5P39940 COG3YER157W 2406 nt3.52□□□□□ -1.85
RSP5P39940 HEF3YNL014W 3135 nt3.52□□□□□ -1.85
RSP5P39940 SEN54YPL083C 1404 nt3.52□□□□□ -1.85
RSP5P39940 KAP95YLR347C 2586 nt3.52□□□□□ -1.85
RSP5P39940 RDS1YCR106W 2499 nt3.51□□□□□ -1.85
RSP5P39940 GPI13YLL031C 3054 nt3.51□□□□□ -1.85
RSP5P39940 CDH1YGL003C 1701 nt3.51□□□□□ -1.85
RSP5P39940 SDH7YDR511W 402 nt3.51□□□□□ -1.85
RSP5P39940 tL(UAG)JtL(UAG)J 82 nt3.51□□□□□ -1.85
RSP5P39940 tL(UAG)L1tL(UAG)L1 82 nt3.51□□□□□ -1.85
RSP5P39940 tL(UAG)L2tL(UAG)L2 82 nt3.51□□□□□ -1.85
RSP5P39940 YKL111CYKL111C 336 nt3.51□□□□□ -1.85
RSP5P39940 FLD1YLR404W 858 nt3.51□□□□□ -1.85
RSP5P39940 YMR158W-BYMR158W-B 321 nt3.51□□□□□ -1.85
RSP5P39940 URA10YMR271C 684 nt3.51□□□□□ -1.85
RSP5P39940 YOR385WYOR385W 873 nt3.51□□□□□ -1.85
RSP5P39940 ENA5YDR038C 3276 nt3.51□□□□□ -1.85
RSP5P39940 ENA2YDR039C 3276 nt3.51□□□□□ -1.85
RSP5P39940 ENA1YDR040C 3276 nt3.51□□□□□ -1.85
RSP5P39940 NIC96YFR002W 2520 nt3.5□□□□□ -1.85
RSP5P39940 STE23YLR389C 3084 nt3.5□□□□□ -1.85
RSP5P39940 YER181CYER181C 324 nt3.5□□□□□ -1.85
RSP5P39940 YJR140W-AYJR140W-A 150 nt3.5□□□□□ -1.85
RSP5P39940 SEC22YLR268W 645 nt3.5□□□□□ -1.85
RSP5P39940 PEP12YOR036W 867 nt3.5□□□□□ -1.85
RSP5P39940 snR13snR13 124 nt3.5□□□□□ -1.85
RSP5P39940 YSY6YBR162W-A 198 nt3.5□□□□□ -1.85
RSP5P39940 RPS17BYDR447C 411 nt3.49□□□□□ -1.85
RSP5P39940 UTP11YKL099C 753 nt3.49□□□□□ -1.85
RSP5P39940 YMR141CYMR141C 309 nt3.49□□□□□ -1.85
RSP5P39940 YPL276WYPL276W 438 nt3.49□□□□□ -1.85
RSP5P39940 DAN4YJR151C 3486 nt3.49□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms