Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.78■■□□□ 1.08
GRIK1P39086 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.78■■□□□ 1.08
GRIK1P39086 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.78■■□□□ 1.08
GRIK1P39086 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.78■■□□□ 1.08
GRIK1P39086 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
GRIK1P39086 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
GRIK1P39086 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.78■■□□□ 1.08
GRIK1P39086 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
GRIK1P39086 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GRIK1P39086 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
GRIK1P39086 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.77■■□□□ 1.08
GRIK1P39086 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GRIK1P39086 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.77■■□□□ 1.08
GRIK1P39086 MCRIP2P1-201ENST00000394346 511 ntBASIC21.77■■□□□ 1.08
GRIK1P39086 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.77■■□□□ 1.08
GRIK1P39086 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.77■■□□□ 1.08
GRIK1P39086 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.77■■□□□ 1.08
GRIK1P39086 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.77■■□□□ 1.08
GRIK1P39086 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
GRIK1P39086 CD99P1-205ENST00000527459 561 ntBASIC21.77■■□□□ 1.08
GRIK1P39086 CYP2T3P-201ENST00000601990 817 ntBASIC21.77■■□□□ 1.08
GRIK1P39086 LINC00565-201ENST00000562710 2331 ntBASIC21.77■■□□□ 1.07
GRIK1P39086 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.76■■□□□ 1.07
GRIK1P39086 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.76■■□□□ 1.07
GRIK1P39086 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GRIK1P39086 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GRIK1P39086 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GRIK1P39086 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GRIK1P39086 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.76■■□□□ 1.07
GRIK1P39086 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.76■■□□□ 1.07
GRIK1P39086 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.76■■□□□ 1.07
GRIK1P39086 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
GRIK1P39086 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.76■■□□□ 1.07
GRIK1P39086 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
GRIK1P39086 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.76■■□□□ 1.07
GRIK1P39086 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.76■■□□□ 1.07
GRIK1P39086 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
GRIK1P39086 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
GRIK1P39086 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
GRIK1P39086 KRT17P1-201ENST00000399211 1546 ntBASIC21.75■■□□□ 1.07
GRIK1P39086 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GRIK1P39086 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.75■■□□□ 1.07
GRIK1P39086 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRIK1P39086 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GRIK1P39086 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.75■■□□□ 1.07
GRIK1P39086 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
GRIK1P39086 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.75■■□□□ 1.07
GRIK1P39086 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC21.75■■□□□ 1.07
GRIK1P39086 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRIK1P39086 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
GRIK1P39086 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.75■■□□□ 1.07
GRIK1P39086 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
GRIK1P39086 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GRIK1P39086 DUSP5P2-201ENST00000426873 1033 ntBASIC21.74■■□□□ 1.07
GRIK1P39086 AC097658.1-201ENST00000475555 843 ntBASIC21.74■■□□□ 1.07
GRIK1P39086 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.74■■□□□ 1.07
GRIK1P39086 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
GRIK1P39086 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.74■■□□□ 1.07
GRIK1P39086 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.74■■□□□ 1.07
GRIK1P39086 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GRIK1P39086 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
GRIK1P39086 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
GRIK1P39086 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRIK1P39086 AL024507.2-201ENST00000606070 2574 ntBASIC21.73■■□□□ 1.07
GRIK1P39086 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GRIK1P39086 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.73■■□□□ 1.07
GRIK1P39086 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.73■■□□□ 1.07
GRIK1P39086 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.73■■□□□ 1.07
GRIK1P39086 AC091874.3-201ENST00000512672 1195 ntBASIC21.73■■□□□ 1.07
GRIK1P39086 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GRIK1P39086 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.73■■□□□ 1.07
GRIK1P39086 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.73■■□□□ 1.07
GRIK1P39086 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms