Protein–RNA interactions for Protein: P38165

RTG3, Retrograde regulation protein 3, yeastyeast

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTG3P38165 FBP1YLR377C 1047 nt5.72□□□□□ -1.49
RTG3P38165 CYB5YNL111C 363 nt5.72□□□□□ -1.49
RTG3P38165 PEX11YOL147C 711 nt5.72□□□□□ -1.49
RTG3P38165 YPL025CYPL025C 558 nt5.72□□□□□ -1.49
RTG3P38165 STV1YMR054W 2673 nt5.72□□□□□ -1.49
RTG3P38165 VAC14YLR386W 2643 nt5.72□□□□□ -1.49
RTG3P38165 PHM7YOL084W 2976 nt5.71□□□□□ -1.49
RTG3P38165 TIM8YJR135W-A 264 nt5.71□□□□□ -1.5
RTG3P38165 NKP2YLR315W 462 nt5.71□□□□□ -1.5
RTG3P38165 LSM2YBL026W 288 nt5.71□□□□□ -1.5
RTG3P38165 FLO8YER109C 2400 nt5.71□□□□□ -1.5
RTG3P38165 TRS85YDR108W 2097 nt5.71□□□□□ -1.5
RTG3P38165 SAP155YFR040W 3009 nt5.71□□□□□ -1.5
RTG3P38165 YKL222CYKL222C 2118 nt5.71□□□□□ -1.5
RTG3P38165 DNF2YDR093W 4839 nt5.7□□□□□ -1.5
RTG3P38165 TFB5YDR079C-A 219 nt5.7□□□□□ -1.5
RTG3P38165 YJR140W-AYJR140W-A 150 nt5.7□□□□□ -1.5
RTG3P38165 MDM32YOR147W 1869 nt5.7□□□□□ -1.5
RTG3P38165 PTR3YFR029W 2037 nt5.7□□□□□ -1.5
RTG3P38165 YCR023CYCR023C 1836 nt5.69□□□□□ -1.5
RTG3P38165 ATP25YMR098C 1839 nt5.69□□□□□ -1.5
RTG3P38165 RIP1YEL024W 648 nt5.69□□□□□ -1.5
RTG3P38165 RPS26BYER131W 360 nt5.69□□□□□ -1.5
RTG3P38165 YIL071W-AYIL071W-A 477 nt5.69□□□□□ -1.5
RTG3P38165 CAF4YKR036C 1932 nt5.69□□□□□ -1.5
RTG3P38165 FRE4YNR060W 2160 nt5.69□□□□□ -1.5
RTG3P38165 STB2YMR053C 2553 nt5.68□□□□□ -1.5
RTG3P38165 FRT2YAL028W 1587 nt5.68□□□□□ -1.5
RTG3P38165 FMP46YKR049C 402 nt5.68□□□□□ -1.5
RTG3P38165 PHO2YDL106C 1680 nt5.68□□□□□ -1.5
RTG3P38165 AFT1YGL071W 2073 nt5.68□□□□□ -1.5
RTG3P38165 DNM1YLL001W 2274 nt5.68□□□□□ -1.5
RTG3P38165 TIF4631YGR162W 2859 nt5.67□□□□□ -1.5
RTG3P38165 YHR078WYHR078W 1659 nt5.67□□□□□ -1.5
RTG3P38165 ARF1YDL192W 546 nt5.67□□□□□ -1.5
RTG3P38165 INA22YIR024C 651 nt5.67□□□□□ -1.5
RTG3P38165 YOR381W-AYOR381W-A 168 nt5.67□□□□□ -1.5
RTG3P38165 BEM4YPL161C 1902 nt5.67□□□□□ -1.5
RTG3P38165 YLL007CYLL007C 1998 nt5.67□□□□□ -1.5
RTG3P38165 IRC3YDR332W 2070 nt5.67□□□□□ -1.5
RTG3P38165 MCM2YBL023C 2607 nt5.66□□□□□ -1.5
RTG3P38165 ELM1YKL048C 1923 nt5.66□□□□□ -1.5
RTG3P38165 JHD2YJR119C 2187 nt5.66□□□□□ -1.5
RTG3P38165 ATP15YPL271W 189 nt5.66□□□□□ -1.5
RTG3P38165 VPS41YDR080W 2979 nt5.66□□□□□ -1.5
RTG3P38165 SIN4YNL236W 2925 nt5.65□□□□□ -1.5
RTG3P38165 NAN1YPL126W 2691 nt5.65□□□□□ -1.5
RTG3P38165 SIP1YDR422C 2448 nt5.65□□□□□ -1.5
RTG3P38165 AIP1YMR092C 1848 nt5.65□□□□□ -1.5
RTG3P38165 YBR238CYBR238C 2196 nt5.65□□□□□ -1.5
RTG3P38165 YDR250CYDR250C 276 nt5.65□□□□□ -1.5
RTG3P38165 SMD1YGR074W 441 nt5.65□□□□□ -1.5
RTG3P38165 RPS23AYGR118W 438 nt5.65□□□□□ -1.5
RTG3P38165 RPS22BYLR367W 393 nt5.65□□□□□ -1.5
RTG3P38165 RFC3YNL290W 1023 nt5.65□□□□□ -1.5
RTG3P38165 DPB11YJL090C 2295 nt5.65□□□□□ -1.51
RTG3P38165 KCC4YCL024W 3114 nt5.65□□□□□ -1.51
RTG3P38165 TUP1YCR084C 2142 nt5.65□□□□□ -1.51
RTG3P38165 FLC1YPL221W 2382 nt5.64□□□□□ -1.51
RTG3P38165 IKS1YJL057C 2004 nt5.64□□□□□ -1.51
RTG3P38165 YBL028CYBL028C 321 nt5.64□□□□□ -1.51
RTG3P38165 NTC20YBR188C 423 nt5.64□□□□□ -1.51
RTG3P38165 TDA1YMR291W 1761 nt5.64□□□□□ -1.51
RTG3P38165 GCR1YPL075W 2358 nt5.64□□□□□ -1.51
RTG3P38165 ATH1YPR026W 3636 nt5.63□□□□□ -1.51
RTG3P38165 PSF1YDR013W 627 nt5.63□□□□□ -1.51
RTG3P38165 SNF3YDL194W 2655 nt5.63□□□□□ -1.51
RTG3P38165 PBS2YJL128C 2007 nt5.63□□□□□ -1.51
RTG3P38165 PGM2YMR105C 1710 nt5.62□□□□□ -1.51
RTG3P38165 YEL045CYEL045C 426 nt5.62□□□□□ -1.51
RTG3P38165 ECT1YGR007W 972 nt5.62□□□□□ -1.51
RTG3P38165 TRM7YBR061C 933 nt5.62□□□□□ -1.51
RTG3P38165 REV1YOR346W 2958 nt5.62□□□□□ -1.51
RTG3P38165 SRS2YJL092W 3525 nt5.62□□□□□ -1.51
RTG3P38165 RPS24AYER074W 408 nt5.61□□□□□ -1.51
RTG3P38165 YKR033CYKR033C 426 nt5.61□□□□□ -1.51
RTG3P38165 YBR224WYBR224W 516 nt5.61□□□□□ -1.51
RTG3P38165 APL6YGR261C 2430 nt5.6□□□□□ -1.51
RTG3P38165 PAN1YIR006C 4443 nt5.6□□□□□ -1.51
RTG3P38165 SSP1YHR184W 1716 nt5.6□□□□□ -1.51
RTG3P38165 BIT61YJL058C 1632 nt5.6□□□□□ -1.51
RTG3P38165 SYF1YDR416W 2580 nt5.6□□□□□ -1.51
RTG3P38165 SNU13YEL026W 381 nt5.6□□□□□ -1.51
RTG3P38165 YER091C-AYER091C-A 222 nt5.6□□□□□ -1.51
RTG3P38165 ULP1YPL020C 1866 nt5.6□□□□□ -1.51
RTG3P38165 KRS1YDR037W 1776 nt5.59□□□□□ -1.51
RTG3P38165 EPO1YMR124W 2832 nt5.58□□□□□ -1.52
RTG3P38165 SRP68YPL243W 1800 nt5.58□□□□□ -1.52
RTG3P38165 OPT2YPR194C 2634 nt5.58□□□□□ -1.52
RTG3P38165 TMA17YDL110C 453 nt5.58□□□□□ -1.52
RTG3P38165 snR46snR46 197 nt5.58□□□□□ -1.52
RTG3P38165 OCA5YHL029C 2040 nt5.57□□□□□ -1.52
RTG3P38165 MSH4YFL003C 2637 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)CtK(CUU)C 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)D1tK(CUU)D1 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)D2tK(CUU)D2 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)E1tK(CUU)E1 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)E2tK(CUU)E2 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)FtK(CUU)F 73 nt5.57□□□□□ -1.52
RTG3P38165 tK(CUU)G1tK(CUU)G1 73 nt5.57□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms