Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RFC1P35251 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.72■■□□□ 1.07
RFC1P35251 RBM17P2-201ENST00000616397 1405 ntBASIC21.72■■□□□ 1.07
RFC1P35251 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.71■■□□□ 1.07
RFC1P35251 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
RFC1P35251 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.71■■□□□ 1.07
RFC1P35251 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.71■■□□□ 1.07
RFC1P35251 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.71■■□□□ 1.07
RFC1P35251 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.71■■□□□ 1.07
RFC1P35251 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RFC1P35251 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
RFC1P35251 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.71■■□□□ 1.07
RFC1P35251 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
RFC1P35251 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
RFC1P35251 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC1P35251 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
RFC1P35251 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RFC1P35251 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.7■■□□□ 1.06
RFC1P35251 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RFC1P35251 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 AL162430.1-201ENST00000480705 870 ntBASIC21.7■■□□□ 1.06
RFC1P35251 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.7■■□□□ 1.06
RFC1P35251 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.7■■□□□ 1.06
RFC1P35251 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.7■■□□□ 1.06
RFC1P35251 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
RFC1P35251 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.7■■□□□ 1.06
RFC1P35251 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.7■■□□□ 1.06
RFC1P35251 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RFC1P35251 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC1P35251 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.69■■□□□ 1.06
RFC1P35251 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
RFC1P35251 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RFC1P35251 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.69■■□□□ 1.06
RFC1P35251 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.69■■□□□ 1.06
RFC1P35251 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.69■■□□□ 1.06
RFC1P35251 MIR5787-201ENST00000611784 55 ntBASIC21.69■■□□□ 1.06
RFC1P35251 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 MYCNOS-205ENST00000641950 531 ntBASIC21.69■■□□□ 1.06
RFC1P35251 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
RFC1P35251 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
RFC1P35251 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.68■■□□□ 1.06
RFC1P35251 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC1P35251 AC243732.1-201ENST00000612648 864 ntBASIC21.68■■□□□ 1.06
RFC1P35251 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.68■■□□□ 1.06
RFC1P35251 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RFC1P35251 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.68■■□□□ 1.06
RFC1P35251 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RFC1P35251 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms