Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.46■□□□□ 0.55
SDHAP31040 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.46■□□□□ 0.55
SDHAP31040 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SDHAP31040 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 AC104187.1-201ENST00000607510 612 ntBASIC18.46■□□□□ 0.55
SDHAP31040 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SDHAP31040 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
SDHAP31040 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SDHAP31040 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.46■□□□□ 0.54
SDHAP31040 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
SDHAP31040 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SDHAP31040 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 YBX1P1-201ENST00000445822 960 ntBASIC18.45■□□□□ 0.54
SDHAP31040 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 TERF1P2-201ENST00000583350 1212 ntBASIC18.45■□□□□ 0.54
SDHAP31040 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SDHAP31040 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.45■□□□□ 0.54
SDHAP31040 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.44■□□□□ 0.54
SDHAP31040 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SDHAP31040 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SDHAP31040 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SDHAP31040 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.44■□□□□ 0.54
SDHAP31040 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.44■□□□□ 0.54
SDHAP31040 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.44■□□□□ 0.54
SDHAP31040 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.44■□□□□ 0.54
SDHAP31040 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SDHAP31040 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.44■□□□□ 0.54
SDHAP31040 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SDHAP31040 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.43■□□□□ 0.54
SDHAP31040 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.43■□□□□ 0.54
SDHAP31040 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SDHAP31040 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.43■□□□□ 0.54
SDHAP31040 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.43■□□□□ 0.54
SDHAP31040 AP001160.3-201ENST00000601484 763 ntBASIC18.43■□□□□ 0.54
SDHAP31040 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SDHAP31040 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SDHAP31040 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
SDHAP31040 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.42■□□□□ 0.54
SDHAP31040 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.42■□□□□ 0.54
SDHAP31040 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.42■□□□□ 0.54
SDHAP31040 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.42■□□□□ 0.54
SDHAP31040 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SDHAP31040 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
SDHAP31040 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.42■□□□□ 0.54
SDHAP31040 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SDHAP31040 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SDHAP31040 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms