Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
GDF1P27539 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.72■□□□□ 0.59
GDF1P27539 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
GDF1P27539 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.72■□□□□ 0.59
GDF1P27539 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.72■□□□□ 0.59
GDF1P27539 AL355472.2-201ENST00000422958 438 ntBASIC18.72■□□□□ 0.59
GDF1P27539 AC073210.2-201ENST00000430369 194 ntBASIC18.72■□□□□ 0.59
GDF1P27539 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.72■□□□□ 0.59
GDF1P27539 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.72■□□□□ 0.59
GDF1P27539 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.72■□□□□ 0.59
GDF1P27539 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.72■□□□□ 0.59
GDF1P27539 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
GDF1P27539 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.72■□□□□ 0.59
GDF1P27539 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
GDF1P27539 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 MCRIP2P1-201ENST00000394346 511 ntBASIC18.71■□□□□ 0.59
GDF1P27539 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.71■□□□□ 0.59
GDF1P27539 CD99P1-205ENST00000527459 561 ntBASIC18.71■□□□□ 0.59
GDF1P27539 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 AC100791.3-201ENST00000617619 330 ntBASIC18.71■□□□□ 0.59
GDF1P27539 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.71■□□□□ 0.59
GDF1P27539 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
GDF1P27539 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
GDF1P27539 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.71■□□□□ 0.59
GDF1P27539 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GDF1P27539 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
GDF1P27539 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.7■□□□□ 0.58
GDF1P27539 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.7■□□□□ 0.58
GDF1P27539 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.7■□□□□ 0.58
GDF1P27539 KRT18P6-201ENST00000555540 1265 ntBASIC18.7■□□□□ 0.58
GDF1P27539 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.7■□□□□ 0.58
GDF1P27539 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
GDF1P27539 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.7■□□□□ 0.58
GDF1P27539 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.7■□□□□ 0.58
GDF1P27539 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
GDF1P27539 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
GDF1P27539 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GDF1P27539 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GDF1P27539 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.69■□□□□ 0.58
GDF1P27539 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GDF1P27539 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
GDF1P27539 CYP2T3P-201ENST00000601990 817 ntBASIC18.69■□□□□ 0.58
GDF1P27539 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
GDF1P27539 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
GDF1P27539 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.69■□□□□ 0.58
GDF1P27539 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GDF1P27539 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.68■□□□□ 0.58
GDF1P27539 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 DUSP5P2-201ENST00000426873 1033 ntBASIC18.68■□□□□ 0.58
GDF1P27539 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.68■□□□□ 0.58
GDF1P27539 AC097658.1-201ENST00000475555 843 ntBASIC18.68■□□□□ 0.58
GDF1P27539 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GDF1P27539 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GDF1P27539 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.68■□□□□ 0.58
GDF1P27539 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.68■□□□□ 0.58
GDF1P27539 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms