Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH3P22223 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH3P22223 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.14■□□□□ 0.81
CDH3P22223 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH3P22223 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
CDH3P22223 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH3P22223 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.14■□□□□ 0.81
CDH3P22223 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CDH3P22223 AL121832.2-201ENST00000610979 668 ntBASIC20.14■□□□□ 0.81
CDH3P22223 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.14■□□□□ 0.81
CDH3P22223 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CDH3P22223 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH3P22223 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDH3P22223 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 RBM17P2-201ENST00000616397 1405 ntBASIC20.13■□□□□ 0.81
CDH3P22223 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.13■□□□□ 0.81
CDH3P22223 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.13■□□□□ 0.81
CDH3P22223 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CDH3P22223 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
CDH3P22223 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.13■□□□□ 0.81
CDH3P22223 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CDH3P22223 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CDH3P22223 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CDH3P22223 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.12■□□□□ 0.81
CDH3P22223 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
CDH3P22223 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.12■□□□□ 0.81
CDH3P22223 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.12■□□□□ 0.81
CDH3P22223 AC007322.4-201ENST00000509611 723 ntBASIC20.12■□□□□ 0.81
CDH3P22223 AC104771.1-201ENST00000603335 964 ntBASIC20.12■□□□□ 0.81
CDH3P22223 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
CDH3P22223 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
CDH3P22223 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
CDH3P22223 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
CDH3P22223 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CDH3P22223 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH3P22223 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 AC083906.2-201ENST00000511578 360 ntBASIC20.11■□□□□ 0.81
CDH3P22223 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH3P22223 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
CDH3P22223 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CDH3P22223 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CDH3P22223 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.11■□□□□ 0.81
CDH3P22223 AC068338.2-201ENST00000563278 1430 ntBASIC20.1■□□□□ 0.81
CDH3P22223 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDH3P22223 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH3P22223 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.1■□□□□ 0.81
CDH3P22223 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDH3P22223 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 AC245052.3-201ENST00000450182 901 ntBASIC20.1■□□□□ 0.81
CDH3P22223 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 AC243732.1-201ENST00000612648 864 ntBASIC20.1■□□□□ 0.81
CDH3P22223 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 AF106564.1-201ENST00000607058 2553 ntBASIC20.1■□□□□ 0.81
CDH3P22223 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDH3P22223 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CDH3P22223 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDH3P22223 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDH3P22223 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms