Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB40ALP0C0E4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 PRORSD1P-201ENST00000295112 541 ntBASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RAB40ALP0C0E4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 KRT18P68-201ENST00000392293 1000 ntBASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 UNC93B5-201ENST00000530315 699 ntBASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 AL024507.2-201ENST00000606070 2574 ntBASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB40ALP0C0E4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB40ALP0C0E4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 AC026366.1-201ENST00000488803 879 ntBASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB40ALP0C0E4 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms