Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CD48P09326 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CD48P09326 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CD48P09326 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.39■■□□□ 1.02
CD48P09326 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CD48P09326 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.39■■□□□ 1.02
CD48P09326 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CD48P09326 KRT18P5-201ENST00000436075 1291 ntBASIC21.39■■□□□ 1.01
CD48P09326 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.39■■□□□ 1.01
CD48P09326 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CD48P09326 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CD48P09326 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CD48P09326 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CD48P09326 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CD48P09326 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.39■■□□□ 1.01
CD48P09326 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CD48P09326 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CD48P09326 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.38■■□□□ 1.01
CD48P09326 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.38■■□□□ 1.01
CD48P09326 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.38■■□□□ 1.01
CD48P09326 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.38■■□□□ 1.01
CD48P09326 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.38■■□□□ 1.01
CD48P09326 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 AL121603.2-201ENST00000557373 2117 ntBASIC21.38■■□□□ 1.01
CD48P09326 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CD48P09326 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CD48P09326 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CD48P09326 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
CD48P09326 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 AC091799.1-201ENST00000422823 811 ntBASIC21.37■■□□□ 1.01
CD48P09326 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.37■■□□□ 1.01
CD48P09326 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.37■■□□□ 1.01
CD48P09326 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.37■■□□□ 1.01
CD48P09326 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 SLC7A5P1-201ENST00000568957 537 ntBASIC21.37■■□□□ 1.01
CD48P09326 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.37■■□□□ 1.01
CD48P09326 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.37■■□□□ 1.01
CD48P09326 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.37■■□□□ 1.01
CD48P09326 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.37■■□□□ 1.01
CD48P09326 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.37■■□□□ 1.01
CD48P09326 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.37■■□□□ 1.01
CD48P09326 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.37■■□□□ 1.01
CD48P09326 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CD48P09326 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.36■■□□□ 1.01
CD48P09326 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CD48P09326 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.36■■□□□ 1.01
CD48P09326 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.36■■□□□ 1.01
CD48P09326 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.36■■□□□ 1.01
CD48P09326 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CD48P09326 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CD48P09326 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CD48P09326 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.35■■□□□ 1.01
CD48P09326 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.35■■□□□ 1.01
CD48P09326 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CD48P09326 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.35■■□□□ 1.01
CD48P09326 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 MYCNOS-205ENST00000641950 531 ntBASIC21.35■■□□□ 1.01
CD48P09326 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CD48P09326 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
CD48P09326 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms