Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC27.5■■□□□ 1.99
COL5A2P05997 AP001412.1-201ENST00000608405 714 ntBASIC27.5■■□□□ 1.99
COL5A2P05997 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
COL5A2P05997 AC116050.2-201ENST00000612102 1779 ntBASIC27.49■■□□□ 1.99
COL5A2P05997 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC27.49■■□□□ 1.99
COL5A2P05997 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
COL5A2P05997 AC120498.8-201ENST00000614275 531 ntBASIC27.49■■□□□ 1.99
COL5A2P05997 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
COL5A2P05997 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
COL5A2P05997 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.48■■□□□ 1.99
COL5A2P05997 AC080038.3-201ENST00000623346 1952 ntBASIC27.48■■□□□ 1.99
COL5A2P05997 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
COL5A2P05997 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL5A2P05997 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL5A2P05997 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
COL5A2P05997 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
COL5A2P05997 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC27.48■■□□□ 1.99
COL5A2P05997 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC27.48■■□□□ 1.99
COL5A2P05997 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC27.48■■□□□ 1.99
COL5A2P05997 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC27.48■■□□□ 1.99
COL5A2P05997 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC27.48■■□□□ 1.99
COL5A2P05997 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL5A2P05997 FAM99A-202ENST00000538190 1989 ntBASIC27.47■■□□□ 1.99
COL5A2P05997 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
COL5A2P05997 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
COL5A2P05997 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
COL5A2P05997 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC27.47■■□□□ 1.99
COL5A2P05997 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC27.46■■□□□ 1.99
COL5A2P05997 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL5A2P05997 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC27.46■■□□□ 1.99
COL5A2P05997 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL5A2P05997 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
COL5A2P05997 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
COL5A2P05997 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC27.46■■□□□ 1.99
COL5A2P05997 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC27.46■■□□□ 1.99
COL5A2P05997 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL5A2P05997 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
COL5A2P05997 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC27.46■■□□□ 1.99
COL5A2P05997 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC27.45■■□□□ 1.99
COL5A2P05997 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.99
COL5A2P05997 PRKY-204ENST00000533551 1019 ntBASIC27.45■■□□□ 1.99
COL5A2P05997 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
COL5A2P05997 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
COL5A2P05997 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
COL5A2P05997 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
COL5A2P05997 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
COL5A2P05997 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
COL5A2P05997 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC27.44■■□□□ 1.98
COL5A2P05997 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC27.44■■□□□ 1.98
COL5A2P05997 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC27.44■■□□□ 1.98
COL5A2P05997 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC27.44■■□□□ 1.98
COL5A2P05997 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.44■■□□□ 1.98
COL5A2P05997 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
COL5A2P05997 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
COL5A2P05997 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC27.44■■□□□ 1.98
COL5A2P05997 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC27.44■■□□□ 1.98
COL5A2P05997 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC27.44■■□□□ 1.98
COL5A2P05997 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC27.44■■□□□ 1.98
COL5A2P05997 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC27.44■■□□□ 1.98
COL5A2P05997 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.44■■□□□ 1.98
COL5A2P05997 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
COL5A2P05997 MOK-233ENST00000524214 1539 ntTSL 2 BASIC27.43■■□□□ 1.98
COL5A2P05997 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
COL5A2P05997 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC27.43■■□□□ 1.98
COL5A2P05997 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC27.43■■□□□ 1.98
COL5A2P05997 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.43■■□□□ 1.98
COL5A2P05997 AL445228.2-201ENST00000605589 952 ntBASIC27.43■■□□□ 1.98
COL5A2P05997 AL353708.3-201ENST00000610272 989 ntBASIC27.43■■□□□ 1.98
COL5A2P05997 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
COL5A2P05997 AC006557.6-201ENST00000623071 864 ntBASIC27.43■■□□□ 1.98
COL5A2P05997 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.43■■□□□ 1.98
COL5A2P05997 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
COL5A2P05997 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.42■■□□□ 1.98
COL5A2P05997 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.42■■□□□ 1.98
COL5A2P05997 AC127496.7-201ENST00000625110 1798 ntBASIC27.42■■□□□ 1.98
COL5A2P05997 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
COL5A2P05997 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
COL5A2P05997 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC27.42■■□□□ 1.98
COL5A2P05997 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC27.42■■□□□ 1.98
COL5A2P05997 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
COL5A2P05997 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
COL5A2P05997 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC27.42■■□□□ 1.98
COL5A2P05997 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms