Protein–RNA interactions for Protein: P04819

CDC9, DNA ligase 1, yeastyeast

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC9P04819 SPT6YGR116W 4356 nt3.44□□□□□ -1.86
CDC9P04819 YDR210W-BYDR210W-B 5313 nt3.44□□□□□ -1.86
CDC9P04819 YDR261W-BYDR261W-B 5313 nt3.44□□□□□ -1.86
CDC9P04819 YFL002W-AYFL002W-A 5313 nt3.44□□□□□ -1.86
CDC9P04819 YGR161W-BYGR161W-B 5313 nt3.44□□□□□ -1.86
CDC9P04819 YLR410W-BYLR410W-B 5313 nt3.44□□□□□ -1.86
CDC9P04819 YCL019WYCL019W 5313 nt3.44□□□□□ -1.86
CDC9P04819 SQS1YNL224C 2304 nt3.43□□□□□ -1.86
CDC9P04819 ERG28YER044C 447 nt3.43□□□□□ -1.86
CDC9P04819 RNR4YGR180C 1038 nt3.43□□□□□ -1.86
CDC9P04819 YAL026C-AYAL026C-A 438 nt3.43□□□□□ -1.86
CDC9P04819 BSC3YLR465C 309 nt3.43□□□□□ -1.86
CDC9P04819 PEX17YNL214W 600 nt3.43□□□□□ -1.86
CDC9P04819 RPB11YOL005C 363 nt3.43□□□□□ -1.86
CDC9P04819 YPR197CYPR197C 564 nt3.43□□□□□ -1.86
CDC9P04819 ARO80YDR421W 2853 nt3.43□□□□□ -1.86
CDC9P04819 MCM7YBR202W 2538 nt3.42□□□□□ -1.86
CDC9P04819 SEA4YBL104C 3117 nt3.42□□□□□ -1.86
CDC9P04819 SNF12YNR023W 1701 nt3.42□□□□□ -1.86
CDC9P04819 YBR225WYBR225W 2703 nt3.42□□□□□ -1.86
CDC9P04819 YDR193WYDR193W 399 nt3.42□□□□□ -1.86
CDC9P04819 YDR431WYDR431W 312 nt3.42□□□□□ -1.86
CDC9P04819 YER107W-AYER107W-A 321 nt3.42□□□□□ -1.86
CDC9P04819 SPP382YLR424W 2127 nt3.42□□□□□ -1.86
CDC9P04819 YML003WYML003W 873 nt3.42□□□□□ -1.86
CDC9P04819 CDC33YOL139C 642 nt3.42□□□□□ -1.86
CDC9P04819 CCT7YJL111W 1653 nt3.42□□□□□ -1.86
CDC9P04819 TSA2YDR453C 591 nt3.41□□□□□ -1.86
CDC9P04819 YGL074CYGL074C 327 nt3.41□□□□□ -1.86
CDC9P04819 YHR214W-AYHR214W-A 486 nt3.41□□□□□ -1.86
CDC9P04819 YJR079WYJR079W 330 nt3.41□□□□□ -1.86
CDC9P04819 YAR068WYAR068W 486 nt3.41□□□□□ -1.86
CDC9P04819 DPB11YJL090C 2295 nt3.41□□□□□ -1.86
CDC9P04819 IRC4YDR540C 540 nt3.4□□□□□ -1.87
CDC9P04819 YJR023CYJR023C 402 nt3.4□□□□□ -1.87
CDC9P04819 RSF2YJR127C 4143 nt3.4□□□□□ -1.87
CDC9P04819 SIP3YNL257C 3690 nt3.4□□□□□ -1.87
CDC9P04819 RPS7AYOR096W 573 nt3.4□□□□□ -1.87
CDC9P04819 MDM32YOR147W 1869 nt3.4□□□□□ -1.87
CDC9P04819 ABP140YOR239W 1887 nt3.4□□□□□ -1.87
CDC9P04819 SLM6YBR266C 453 nt3.4□□□□□ -1.87
CDC9P04819 CHA4YLR098C 1947 nt3.4□□□□□ -1.87
CDC9P04819 APE2YKL157W 2859 nt3.39□□□□□ -1.87
CDC9P04819 PDC2YDR081C 2778 nt3.39□□□□□ -1.87
CDC9P04819 HEF3YNL014W 3135 nt3.39□□□□□ -1.87
CDC9P04819 RRF1YHR038W 693 nt3.39□□□□□ -1.87
CDC9P04819 YIL030W-AYIL030W-A 339 nt3.39□□□□□ -1.87
CDC9P04819 COX19YLL018C-A 297 nt3.39□□□□□ -1.87
CDC9P04819 ERP4YOR016C 624 nt3.39□□□□□ -1.87
CDC9P04819 NSL1YPL233W 651 nt3.39□□□□□ -1.87
CDC9P04819 NUP60YAR002W 1620 nt3.39□□□□□ -1.87
CDC9P04819 POM152YMR129W 4014 nt3.39□□□□□ -1.87
CDC9P04819 ATP17YDR377W 306 nt3.38□□□□□ -1.87
CDC9P04819 SDH7YDR511W 402 nt3.38□□□□□ -1.87
CDC9P04819 MRP8YKL142W 660 nt3.38□□□□□ -1.87
CDC9P04819 YMR294W-AYMR294W-A 360 nt3.38□□□□□ -1.87
CDC9P04819 ZEO1YOL109W 342 nt3.38□□□□□ -1.87
CDC9P04819 YPL185WYPL185W 396 nt3.38□□□□□ -1.87
CDC9P04819 NPR1YNL183C 2373 nt3.38□□□□□ -1.87
CDC9P04819 DIA2YOR080W 2199 nt3.38□□□□□ -1.87
CDC9P04819 PRP22YER013W 3438 nt3.38□□□□□ -1.87
CDC9P04819 EXO84YBR102C 2262 nt3.37□□□□□ -1.87
CDC9P04819 OSH3YHR073W 2991 nt3.37□□□□□ -1.87
CDC9P04819 ROY1YMR258C 1662 nt3.37□□□□□ -1.87
CDC9P04819 FMP32YFL046W 624 nt3.37□□□□□ -1.87
CDC9P04819 YHL006W-AYHL006W-A 354 nt3.37□□□□□ -1.87
CDC9P04819 RIM11YMR139W 1113 nt3.37□□□□□ -1.87
CDC9P04819 SSN8YNL025C 972 nt3.37□□□□□ -1.87
CDC9P04819 RFC3YNL290W 1023 nt3.37□□□□□ -1.87
CDC9P04819 RPL20BYOR312C 519 nt3.37□□□□□ -1.87
CDC9P04819 YKL100CYKL100C 1764 nt3.37□□□□□ -1.87
CDC9P04819 NIC96YFR002W 2520 nt3.37□□□□□ -1.87
CDC9P04819 TFC1YBR123C 1950 nt3.36□□□□□ -1.87
CDC9P04819 MRH1YDR033W 963 nt3.36□□□□□ -1.87
CDC9P04819 RPS20YHL015W 366 nt3.36□□□□□ -1.87
CDC9P04819 YJR140W-AYJR140W-A 150 nt3.36□□□□□ -1.87
CDC9P04819 YKL111CYKL111C 336 nt3.36□□□□□ -1.87
CDC9P04819 SEC22YLR268W 645 nt3.36□□□□□ -1.87
CDC9P04819 snR13snR13 124 nt3.36□□□□□ -1.87
CDC9P04819 YPR014CYPR014C 330 nt3.36□□□□□ -1.87
CDC9P04819 YLR352WYLR352W 2424 nt3.36□□□□□ -1.87
CDC9P04819 HFD1YMR110C 1599 nt3.36□□□□□ -1.87
CDC9P04819 NDT80YHR124W 1884 nt3.36□□□□□ -1.87
CDC9P04819 TOM70YNL121C 1854 nt3.36□□□□□ -1.87
CDC9P04819 NOG1YPL093W 1944 nt3.36□□□□□ -1.87
CDC9P04819 RIX1YHR197W 2292 nt3.36□□□□□ -1.87
CDC9P04819 SWI1YPL016W 3945 nt3.36□□□□□ -1.87
CDC9P04819 GPI13YLL031C 3054 nt3.35□□□□□ -1.87
CDC9P04819 GNT1YOR320C 1476 nt3.35□□□□□ -1.87
CDC9P04819 STU1YBL034C 4542 nt3.35□□□□□ -1.87
CDC9P04819 STE14YDR410C 720 nt3.35□□□□□ -1.87
CDC9P04819 YEL018C-AYEL018C-A 534 nt3.35□□□□□ -1.87
CDC9P04819 YNL146WYNL146W 303 nt3.35□□□□□ -1.87
CDC9P04819 YOR385WYOR385W 873 nt3.35□□□□□ -1.87
CDC9P04819 LOS1YKL205W 3303 nt3.35□□□□□ -1.87
CDC9P04819 NUP159YIL115C 4383 nt3.35□□□□□ -1.87
CDC9P04819 FUS1YCL027W 1539 nt3.34□□□□□ -1.87
CDC9P04819 BOI1YBL085W 2943 nt3.34□□□□□ -1.87
CDC9P04819 YGR025WYGR025W 303 nt3.34□□□□□ -1.87
CDC9P04819 NOP19YGR251W 591 nt3.34□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 18.8 ms