Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04436 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04436 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
P04436 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.85■□□□□ 0.61
P04436 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.85■□□□□ 0.61
P04436 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.85■□□□□ 0.61
P04436 AC098934.4-201ENST00000564127 592 ntBASIC18.85■□□□□ 0.61
P04436 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
P04436 CYP2T3P-201ENST00000601990 817 ntBASIC18.85■□□□□ 0.61
P04436 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
P04436 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.85■□□□□ 0.61
P04436 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
P04436 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
P04436 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.85■□□□□ 0.61
P04436 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.84■□□□□ 0.61
P04436 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.84■□□□□ 0.61
P04436 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.84■□□□□ 0.61
P04436 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.84■□□□□ 0.61
P04436 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.84■□□□□ 0.61
P04436 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 AL355472.2-201ENST00000422958 438 ntBASIC18.84■□□□□ 0.61
P04436 AC097658.1-201ENST00000475555 843 ntBASIC18.84■□□□□ 0.61
P04436 CD99P1-205ENST00000527459 561 ntBASIC18.84■□□□□ 0.61
P04436 KRT18P6-201ENST00000555540 1265 ntBASIC18.84■□□□□ 0.61
P04436 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.84■□□□□ 0.61
P04436 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
P04436 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
P04436 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04436 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04436 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
P04436 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.83■□□□□ 0.61
P04436 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.83■□□□□ 0.61
P04436 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04436 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.83■□□□□ 0.61
P04436 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
P04436 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
P04436 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
P04436 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.83■□□□□ 0.6
P04436 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.83■□□□□ 0.6
P04436 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
P04436 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.83■□□□□ 0.6
P04436 AL589743.5-201ENST00000616611 1050 ntBASIC18.83■□□□□ 0.6
P04436 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.83■□□□□ 0.6
P04436 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04436 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
P04436 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
P04436 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.83■□□□□ 0.6
P04436 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
P04436 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.83■□□□□ 0.6
P04436 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
P04436 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.82■□□□□ 0.6
P04436 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
P04436 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
P04436 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.82■□□□□ 0.6
P04436 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.82■□□□□ 0.6
P04436 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
P04436 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
P04436 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.82■□□□□ 0.6
P04436 KRT18P68-201ENST00000392293 1000 ntBASIC18.82■□□□□ 0.6
P04436 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.82■□□□□ 0.6
P04436 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.82■□□□□ 0.6
P04436 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.82■□□□□ 0.6
P04436 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
P04436 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
P04436 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04436 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.82■□□□□ 0.6
P04436 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.82■□□□□ 0.6
P04436 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms