Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MT-ND1P03886 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
MT-ND1P03886 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.4■□□□□ 0.7
MT-ND1P03886 AL162377.1-201ENST00000618844 1793 ntBASIC19.4■□□□□ 0.7
MT-ND1P03886 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.4■□□□□ 0.7
MT-ND1P03886 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
MT-ND1P03886 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.4■□□□□ 0.7
MT-ND1P03886 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MT-ND1P03886 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MT-ND1P03886 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
MT-ND1P03886 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.39■□□□□ 0.7
MT-ND1P03886 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND1P03886 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND1P03886 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND1P03886 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND1P03886 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
MT-ND1P03886 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 UNC93B3-201ENST00000308076 687 ntBASIC19.39■□□□□ 0.69
MT-ND1P03886 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.39■□□□□ 0.69
MT-ND1P03886 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.39■□□□□ 0.69
MT-ND1P03886 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.39■□□□□ 0.69
MT-ND1P03886 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MT-ND1P03886 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MT-ND1P03886 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MT-ND1P03886 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.38■□□□□ 0.69
MT-ND1P03886 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND1P03886 BX842568.3-201ENST00000418104 571 ntBASIC19.38■□□□□ 0.69
MT-ND1P03886 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
MT-ND1P03886 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.38■□□□□ 0.69
MT-ND1P03886 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND1P03886 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.38■□□□□ 0.69
MT-ND1P03886 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
MT-ND1P03886 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.38■□□□□ 0.69
MT-ND1P03886 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MT-ND1P03886 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
MT-ND1P03886 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.37■□□□□ 0.69
MT-ND1P03886 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
MT-ND1P03886 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-ND1P03886 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
MT-ND1P03886 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
MT-ND1P03886 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MT-ND1P03886 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
MT-ND1P03886 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
MT-ND1P03886 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.37■□□□□ 0.69
MT-ND1P03886 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-ND1P03886 MIR4767-201ENST00000582827 78 ntBASIC19.37■□□□□ 0.69
MT-ND1P03886 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.37■□□□□ 0.69
MT-ND1P03886 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MT-ND1P03886 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms