Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
TRBC1P01850 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 AL137060.1-201ENST00000618151 2648 ntBASIC20.69■□□□□ 0.9
TRBC1P01850 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRBC1P01850 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRBC1P01850 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRBC1P01850 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
TRBC1P01850 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRBC1P01850 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.68■□□□□ 0.9
TRBC1P01850 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.68■□□□□ 0.9
TRBC1P01850 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBC1P01850 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.68■□□□□ 0.9
TRBC1P01850 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.68■□□□□ 0.9
TRBC1P01850 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBC1P01850 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
TRBC1P01850 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRBC1P01850 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRBC1P01850 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
TRBC1P01850 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 NCF1B-203ENST00000435988 1254 ntBASIC20.67■□□□□ 0.9
TRBC1P01850 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
TRBC1P01850 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.67■□□□□ 0.9
TRBC1P01850 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TRBC1P01850 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TRBC1P01850 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TRBC1P01850 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBC1P01850 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.67■□□□□ 0.9
TRBC1P01850 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBC1P01850 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBC1P01850 AL512625.2-201ENST00000417533 625 ntBASIC20.66■□□□□ 0.9
TRBC1P01850 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 AF201337.1-201ENST00000520239 748 ntBASIC20.66■□□□□ 0.9
TRBC1P01850 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.66■□□□□ 0.9
TRBC1P01850 AL121832.2-201ENST00000610979 668 ntBASIC20.66■□□□□ 0.9
TRBC1P01850 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.66■□□□□ 0.9
TRBC1P01850 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRBC1P01850 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
TRBC1P01850 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRBC1P01850 PLK5-205ENST00000642079 1969 ntBASIC20.66■□□□□ 0.9
TRBC1P01850 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
TRBC1P01850 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBC1P01850 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBC1P01850 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBC1P01850 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBC1P01850 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBC1P01850 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBC1P01850 AC083906.2-201ENST00000511578 360 ntBASIC20.65■□□□□ 0.9
TRBC1P01850 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.65■□□□□ 0.9
TRBC1P01850 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
TRBC1P01850 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBC1P01850 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.65■□□□□ 0.9
TRBC1P01850 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
TRBC1P01850 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBC1P01850 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.64■□□□□ 0.9
TRBC1P01850 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.64■□□□□ 0.9
TRBC1P01850 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 AC093787.1-201ENST00000450396 207 ntBASIC20.64■□□□□ 0.89
TRBC1P01850 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRBC1P01850 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBC1P01850 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.64■□□□□ 0.89
TRBC1P01850 AC105036.2-201ENST00000569468 176 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms