Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FAM201B-201ENST00000458407 597 ntBASIC20.23■□□□□ 0.83
CPNE6O95741 MIR4651-201ENST00000582622 73 ntBASIC20.23■□□□□ 0.83
CPNE6O95741 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE6O95741 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.23■□□□□ 0.83
CPNE6O95741 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CPNE6O95741 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CPNE6O95741 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE6O95741 AC010542.4-201ENST00000563151 1910 ntBASIC20.23■□□□□ 0.83
CPNE6O95741 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE6O95741 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.23■□□□□ 0.83
CPNE6O95741 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE6O95741 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPNE6O95741 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE6O95741 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CPNE6O95741 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.22■□□□□ 0.83
CPNE6O95741 BX276092.2-201ENST00000417668 665 ntBASIC20.22■□□□□ 0.83
CPNE6O95741 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.22■□□□□ 0.83
CPNE6O95741 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.22■□□□□ 0.83
CPNE6O95741 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPNE6O95741 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.21■□□□□ 0.83
CPNE6O95741 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.21■□□□□ 0.83
CPNE6O95741 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPNE6O95741 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPNE6O95741 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE6O95741 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE6O95741 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.2■□□□□ 0.82
CPNE6O95741 RARRES2P4-201ENST00000514074 484 ntBASIC20.2■□□□□ 0.82
CPNE6O95741 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.2■□□□□ 0.82
CPNE6O95741 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.2■□□□□ 0.82
CPNE6O95741 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CPNE6O95741 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CPNE6O95741 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPNE6O95741 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE6O95741 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE6O95741 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CPNE6O95741 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.19■□□□□ 0.82
CPNE6O95741 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPNE6O95741 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE6O95741 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 RNA5SP413-201ENST00000516373 109 ntBASIC20.19■□□□□ 0.82
CPNE6O95741 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.19■□□□□ 0.82
CPNE6O95741 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.19■□□□□ 0.82
CPNE6O95741 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPNE6O95741 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPNE6O95741 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.19■□□□□ 0.82
CPNE6O95741 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPNE6O95741 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPNE6O95741 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE6O95741 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.18■□□□□ 0.82
CPNE6O95741 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE6O95741 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.18■□□□□ 0.82
CPNE6O95741 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPNE6O95741 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPNE6O95741 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPNE6O95741 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPNE6O95741 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.18■□□□□ 0.82
CPNE6O95741 AC010980.2-201ENST00000587099 1412 ntBASIC20.18■□□□□ 0.82
CPNE6O95741 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE6O95741 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPNE6O95741 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.17■□□□□ 0.82
CPNE6O95741 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms