Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CLPXO76031 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CLPXO76031 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CLPXO76031 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 NEFHP1-201ENST00000412845 2629 ntBASIC18.67■□□□□ 0.58
CLPXO76031 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.67■□□□□ 0.58
CLPXO76031 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.67■□□□□ 0.58
CLPXO76031 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.67■□□□□ 0.58
CLPXO76031 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 AC005703.6-201ENST00000623265 1329 ntBASIC18.67■□□□□ 0.58
CLPXO76031 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CLPXO76031 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CLPXO76031 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CLPXO76031 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.66■□□□□ 0.58
CLPXO76031 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.66■□□□□ 0.58
CLPXO76031 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CLPXO76031 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.66■□□□□ 0.58
CLPXO76031 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.65■□□□□ 0.58
CLPXO76031 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.65■□□□□ 0.58
CLPXO76031 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.65■□□□□ 0.58
CLPXO76031 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CLPXO76031 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
CLPXO76031 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.64■□□□□ 0.58
CLPXO76031 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.58
CLPXO76031 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.64■□□□□ 0.58
CLPXO76031 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.64■□□□□ 0.58
CLPXO76031 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
CLPXO76031 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.64■□□□□ 0.57
CLPXO76031 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.64■□□□□ 0.57
CLPXO76031 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CLPXO76031 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.64■□□□□ 0.57
CLPXO76031 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.64■□□□□ 0.57
CLPXO76031 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.64■□□□□ 0.57
CLPXO76031 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CLPXO76031 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPXO76031 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CLPXO76031 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLPXO76031 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CLPXO76031 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.63■□□□□ 0.57
CLPXO76031 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CLPXO76031 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPXO76031 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CLPXO76031 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 AC004687.1-201ENST00000579003 1625 ntBASIC18.63■□□□□ 0.57
CLPXO76031 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPXO76031 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLPXO76031 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPXO76031 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPXO76031 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLPXO76031 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLPXO76031 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CLPXO76031 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPXO76031 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC18.62■□□□□ 0.57
CLPXO76031 MIR935-201ENST00000401179 91 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms