Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CPNE3O75131 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.75■□□□□ 0.75
CPNE3O75131 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CPNE3O75131 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CPNE3O75131 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE3O75131 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 FAM21FP-204ENST00000608637 956 ntBASIC19.75■□□□□ 0.75
CPNE3O75131 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE3O75131 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE3O75131 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE3O75131 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 AC091799.1-201ENST00000422823 811 ntBASIC19.74■□□□□ 0.75
CPNE3O75131 FAM201B-201ENST00000458407 597 ntBASIC19.74■□□□□ 0.75
CPNE3O75131 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.74■□□□□ 0.75
CPNE3O75131 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 MIR4651-201ENST00000582622 73 ntBASIC19.74■□□□□ 0.75
CPNE3O75131 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.74■□□□□ 0.75
CPNE3O75131 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CPNE3O75131 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE3O75131 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CPNE3O75131 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE3O75131 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE3O75131 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE3O75131 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE3O75131 AC097658.1-201ENST00000475555 843 ntBASIC19.73■□□□□ 0.75
CPNE3O75131 RNA5SP413-201ENST00000516373 109 ntBASIC19.73■□□□□ 0.75
CPNE3O75131 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE3O75131 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE3O75131 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE3O75131 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE3O75131 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CPNE3O75131 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CPNE3O75131 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.72■□□□□ 0.75
CPNE3O75131 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CPNE3O75131 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE3O75131 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.72■□□□□ 0.75
CPNE3O75131 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.72■□□□□ 0.75
CPNE3O75131 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.72■□□□□ 0.75
CPNE3O75131 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE3O75131 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.72■□□□□ 0.75
CPNE3O75131 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE3O75131 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CPNE3O75131 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CPNE3O75131 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPNE3O75131 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CPNE3O75131 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE3O75131 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
CPNE3O75131 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE3O75131 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms