Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXD2O60548 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXD2O60548 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
FOXD2O60548 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXD2O60548 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.74■□□□□ 0.91
FOXD2O60548 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
FOXD2O60548 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
FOXD2O60548 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD2O60548 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXD2O60548 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.73■□□□□ 0.91
FOXD2O60548 ECEL1P1-201ENST00000373592 1742 ntBASIC20.73■□□□□ 0.91
FOXD2O60548 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
FOXD2O60548 OR7E47P-201ENST00000546390 1422 ntBASIC20.73■□□□□ 0.91
FOXD2O60548 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD2O60548 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
FOXD2O60548 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD2O60548 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.73■□□□□ 0.91
FOXD2O60548 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.73■□□□□ 0.91
FOXD2O60548 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
FOXD2O60548 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
FOXD2O60548 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
FOXD2O60548 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXD2O60548 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
FOXD2O60548 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
FOXD2O60548 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
FOXD2O60548 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
FOXD2O60548 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.72■□□□□ 0.91
FOXD2O60548 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
FOXD2O60548 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
FOXD2O60548 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
FOXD2O60548 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXD2O60548 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.71■□□□□ 0.91
FOXD2O60548 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXD2O60548 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 AP006587.3-201ENST00000525742 1516 ntBASIC20.71■□□□□ 0.91
FOXD2O60548 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
FOXD2O60548 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.71■□□□□ 0.91
FOXD2O60548 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FOXD2O60548 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.7■□□□□ 0.9
FOXD2O60548 PNMA6B-201ENST00000538162 1200 ntBASIC20.7■□□□□ 0.9
FOXD2O60548 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.7■□□□□ 0.9
FOXD2O60548 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
FOXD2O60548 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
FOXD2O60548 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FOXD2O60548 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
FOXD2O60548 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
FOXD2O60548 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD2O60548 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FOXD2O60548 AC233702.5-201ENST00000584107 538 ntBASIC20.69■□□□□ 0.9
FOXD2O60548 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FOXD2O60548 AL589743.5-201ENST00000616611 1050 ntBASIC20.69■□□□□ 0.9
FOXD2O60548 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.69■□□□□ 0.9
FOXD2O60548 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
FOXD2O60548 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FOXD2O60548 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
FOXD2O60548 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD2O60548 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
FOXD2O60548 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD2O60548 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD2O60548 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
FOXD2O60548 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms