Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.63■■□□□ 1.85
KCNQ3O43525 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.63■■□□□ 1.85
KCNQ3O43525 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.63■■□□□ 1.85
KCNQ3O43525 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC26.63■■□□□ 1.85
KCNQ3O43525 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.63■■□□□ 1.85
KCNQ3O43525 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
KCNQ3O43525 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
KCNQ3O43525 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC26.62■■□□□ 1.85
KCNQ3O43525 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.62■■□□□ 1.85
KCNQ3O43525 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC26.62■■□□□ 1.85
KCNQ3O43525 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 PNMA6B-201ENST00000538162 1200 ntBASIC26.62■■□□□ 1.85
KCNQ3O43525 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.62■■□□□ 1.85
KCNQ3O43525 AC105020.6-201ENST00000621523 1217 ntBASIC26.62■■□□□ 1.85
KCNQ3O43525 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC26.62■■□□□ 1.85
KCNQ3O43525 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC26.62■■□□□ 1.85
KCNQ3O43525 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
KCNQ3O43525 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC26.62■■□□□ 1.85
KCNQ3O43525 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
KCNQ3O43525 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
KCNQ3O43525 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
KCNQ3O43525 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
KCNQ3O43525 TUB-203ENST00000534099 1759 ntTSL 2 BASIC26.61■■□□□ 1.85
KCNQ3O43525 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC26.6■■□□□ 1.85
KCNQ3O43525 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 AL158047.1-201ENST00000445918 881 ntBASIC26.6■■□□□ 1.85
KCNQ3O43525 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.6■■□□□ 1.85
KCNQ3O43525 AC233263.1-201ENST00000578059 224 ntBASIC26.6■■□□□ 1.85
KCNQ3O43525 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.6■■□□□ 1.85
KCNQ3O43525 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
KCNQ3O43525 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC26.6■■□□□ 1.85
KCNQ3O43525 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
KCNQ3O43525 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
KCNQ3O43525 FBXW4P1-201ENST00000426721 2239 ntBASIC26.59■■□□□ 1.85
KCNQ3O43525 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
KCNQ3O43525 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC26.59■■□□□ 1.85
KCNQ3O43525 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.59■■□□□ 1.85
KCNQ3O43525 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC26.59■■□□□ 1.85
KCNQ3O43525 AC142381.4-202ENST00000563973 229 ntBASIC26.59■■□□□ 1.85
KCNQ3O43525 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KCNQ3O43525 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC26.58■■□□□ 1.85
KCNQ3O43525 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC26.58■■□□□ 1.85
KCNQ3O43525 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNQ3O43525 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNQ3O43525 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNQ3O43525 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC26.58■■□□□ 1.85
KCNQ3O43525 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.58■■□□□ 1.85
KCNQ3O43525 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.58■■□□□ 1.85
KCNQ3O43525 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC26.58■■□□□ 1.85
KCNQ3O43525 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNQ3O43525 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
KCNQ3O43525 AC092368.3-202ENST00000574180 1591 ntBASIC26.58■■□□□ 1.85
KCNQ3O43525 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
KCNQ3O43525 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.84
KCNQ3O43525 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
KCNQ3O43525 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.57■■□□□ 1.84
KCNQ3O43525 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.57■■□□□ 1.84
KCNQ3O43525 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 UNC93B4-201ENST00000505679 747 ntBASIC26.57■■□□□ 1.84
KCNQ3O43525 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.57■■□□□ 1.84
KCNQ3O43525 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC26.57■■□□□ 1.84
KCNQ3O43525 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.57■■□□□ 1.84
KCNQ3O43525 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 NXN-202ENST00000537628 1340 ntTSL 3 BASIC26.57■■□□□ 1.84
KCNQ3O43525 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
KCNQ3O43525 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC26.57■■□□□ 1.84
KCNQ3O43525 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms