Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.06■□□□□ 0.96
MTSS1O43312 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTSS1O43312 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
MTSS1O43312 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
MTSS1O43312 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.05■□□□□ 0.96
MTSS1O43312 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
MTSS1O43312 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTSS1O43312 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
MTSS1O43312 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.05■□□□□ 0.96
MTSS1O43312 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTSS1O43312 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MTSS1O43312 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
MTSS1O43312 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
MTSS1O43312 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
MTSS1O43312 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
MTSS1O43312 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
MTSS1O43312 FEM1AP1-201ENST00000431297 1995 ntBASIC21.05■□□□□ 0.96
MTSS1O43312 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTSS1O43312 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
MTSS1O43312 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTSS1O43312 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTSS1O43312 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
MTSS1O43312 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
MTSS1O43312 AC091799.1-201ENST00000422823 811 ntBASIC21.04■□□□□ 0.96
MTSS1O43312 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.04■□□□□ 0.96
MTSS1O43312 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
MTSS1O43312 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.04■□□□□ 0.96
MTSS1O43312 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 AC027702.1-201ENST00000563810 1770 ntBASIC21.03■□□□□ 0.96
MTSS1O43312 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.03■□□□□ 0.96
MTSS1O43312 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.03■□□□□ 0.96
MTSS1O43312 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
MTSS1O43312 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.03■□□□□ 0.96
MTSS1O43312 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.03■□□□□ 0.96
MTSS1O43312 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
MTSS1O43312 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.03■□□□□ 0.96
MTSS1O43312 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
MTSS1O43312 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
MTSS1O43312 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MTSS1O43312 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.96
MTSS1O43312 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MTSS1O43312 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 AC007322.3-201ENST00000426526 701 ntBASIC21.02■□□□□ 0.96
MTSS1O43312 KRT18P5-201ENST00000436075 1291 ntBASIC21.02■□□□□ 0.96
MTSS1O43312 CDV3P1-201ENST00000471403 739 ntBASIC21.02■□□□□ 0.96
MTSS1O43312 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
MTSS1O43312 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.02■□□□□ 0.96
MTSS1O43312 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.02■□□□□ 0.96
MTSS1O43312 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.02■□□□□ 0.96
MTSS1O43312 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
MTSS1O43312 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.02■□□□□ 0.96
MTSS1O43312 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
MTSS1O43312 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.02■□□□□ 0.95
MTSS1O43312 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.01■□□□□ 0.95
MTSS1O43312 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
MTSS1O43312 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.01■□□□□ 0.95
MTSS1O43312 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MTSS1O43312 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
MTSS1O43312 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.01■□□□□ 0.95
MTSS1O43312 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
MTSS1O43312 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.01■□□□□ 0.95
MTSS1O43312 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.01■□□□□ 0.95
MTSS1O43312 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.01■□□□□ 0.95
MTSS1O43312 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.01■□□□□ 0.95
MTSS1O43312 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.01■□□□□ 0.95
MTSS1O43312 FP700111.2-201ENST00000619190 1892 ntBASIC21.01■□□□□ 0.95
MTSS1O43312 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
MTSS1O43312 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms