Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
FOXN1O15353 NME6-213ENST00000451657 871 ntTSL 2 BASIC24.73■■□□□ 1.55
FOXN1O15353 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.73■■□□□ 1.55
FOXN1O15353 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC24.73■■□□□ 1.55
FOXN1O15353 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC24.73■■□□□ 1.55
FOXN1O15353 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.73■■□□□ 1.55
FOXN1O15353 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXN1O15353 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.72■■□□□ 1.55
FOXN1O15353 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
FOXN1O15353 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXN1O15353 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.72■■□□□ 1.55
FOXN1O15353 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
FOXN1O15353 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC24.72■■□□□ 1.55
FOXN1O15353 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.72■■□□□ 1.55
FOXN1O15353 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC24.72■■□□□ 1.55
FOXN1O15353 SNX21-213ENST00000614929 587 ntTSL 5 BASIC24.72■■□□□ 1.55
FOXN1O15353 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC24.72■■□□□ 1.55
FOXN1O15353 AC092865.7-201ENST00000641832 219 ntBASIC24.72■■□□□ 1.55
FOXN1O15353 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.72■■□□□ 1.55
FOXN1O15353 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
FOXN1O15353 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXN1O15353 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
FOXN1O15353 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
FOXN1O15353 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC24.71■■□□□ 1.55
FOXN1O15353 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC24.71■■□□□ 1.55
FOXN1O15353 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
FOXN1O15353 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC24.71■■□□□ 1.55
FOXN1O15353 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXN1O15353 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
FOXN1O15353 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
FOXN1O15353 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.55
FOXN1O15353 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 CRAT-202ENST00000393384 973 ntTSL 2 BASIC24.7■■□□□ 1.54
FOXN1O15353 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC24.7■■□□□ 1.54
FOXN1O15353 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC24.7■■□□□ 1.54
FOXN1O15353 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC24.7■■□□□ 1.54
FOXN1O15353 USF2-205ENST00000594064 1179 ntTSL 2 BASIC24.7■■□□□ 1.54
FOXN1O15353 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC24.7■■□□□ 1.54
FOXN1O15353 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.7■■□□□ 1.54
FOXN1O15353 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
FOXN1O15353 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.69■■□□□ 1.54
FOXN1O15353 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXN1O15353 LINC01960-201ENST00000563759 1884 ntBASIC24.69■■□□□ 1.54
FOXN1O15353 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.69■■□□□ 1.54
FOXN1O15353 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
FOXN1O15353 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
FOXN1O15353 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXN1O15353 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC24.69■■□□□ 1.54
FOXN1O15353 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.69■■□□□ 1.54
FOXN1O15353 PNMA6B-201ENST00000538162 1200 ntBASIC24.69■■□□□ 1.54
FOXN1O15353 AL121894.2-201ENST00000602977 491 ntBASIC24.69■■□□□ 1.54
FOXN1O15353 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.69■■□□□ 1.54
FOXN1O15353 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
FOXN1O15353 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.68■■□□□ 1.54
FOXN1O15353 AC092053.2-201ENST00000640557 1818 ntBASIC24.68■■□□□ 1.54
FOXN1O15353 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 AL162412.1-201ENST00000567129 965 ntBASIC24.68■■□□□ 1.54
FOXN1O15353 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.68■■□□□ 1.54
FOXN1O15353 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC24.68■■□□□ 1.54
FOXN1O15353 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC24.68■■□□□ 1.54
FOXN1O15353 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC24.68■■□□□ 1.54
FOXN1O15353 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
FOXN1O15353 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.67■■□□□ 1.54
FOXN1O15353 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
FOXN1O15353 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.67■■□□□ 1.54
FOXN1O15353 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 ISG20-202ENST00000379224 540 ntTSL 3 BASIC24.67■■□□□ 1.54
FOXN1O15353 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC24.67■■□□□ 1.54
FOXN1O15353 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.67■■□□□ 1.54
FOXN1O15353 AL591742.1-201ENST00000604433 565 ntBASIC24.67■■□□□ 1.54
FOXN1O15353 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
FOXN1O15353 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 AC007375.3-201ENST00000600936 2314 ntBASIC24.66■■□□□ 1.54
FOXN1O15353 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
FOXN1O15353 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC24.66■■□□□ 1.54
FOXN1O15353 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms