Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.6■□□□□ 0.89
PFDN6O15212 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.6■□□□□ 0.89
PFDN6O15212 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.6■□□□□ 0.89
PFDN6O15212 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PFDN6O15212 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.6■□□□□ 0.89
PFDN6O15212 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PFDN6O15212 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN6O15212 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.59■□□□□ 0.89
PFDN6O15212 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.59■□□□□ 0.89
PFDN6O15212 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN6O15212 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN6O15212 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN6O15212 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PFDN6O15212 MIR6821-201ENST00000617625 74 ntBASIC20.59■□□□□ 0.89
PFDN6O15212 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.59■□□□□ 0.89
PFDN6O15212 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PFDN6O15212 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.59■□□□□ 0.89
PFDN6O15212 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 SLC7A5P2-201ENST00000553010 536 ntBASIC20.58■□□□□ 0.89
PFDN6O15212 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.58■□□□□ 0.89
PFDN6O15212 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.58■□□□□ 0.89
PFDN6O15212 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.58■□□□□ 0.89
PFDN6O15212 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PFDN6O15212 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PFDN6O15212 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PFDN6O15212 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.88
PFDN6O15212 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.57■□□□□ 0.88
PFDN6O15212 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.57■□□□□ 0.88
PFDN6O15212 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.57■□□□□ 0.88
PFDN6O15212 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.57■□□□□ 0.88
PFDN6O15212 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.57■□□□□ 0.88
PFDN6O15212 RARRES2P11-201ENST00000635158 484 ntBASIC20.57■□□□□ 0.88
PFDN6O15212 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PFDN6O15212 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PFDN6O15212 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 PLK5-205ENST00000642079 1969 ntBASIC20.57■□□□□ 0.88
PFDN6O15212 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.57■□□□□ 0.88
PFDN6O15212 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
PFDN6O15212 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PFDN6O15212 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PFDN6O15212 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.56■□□□□ 0.88
PFDN6O15212 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
PFDN6O15212 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
PFDN6O15212 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.56■□□□□ 0.88
PFDN6O15212 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
PFDN6O15212 NTF6G-201ENST00000591094 616 ntBASIC20.56■□□□□ 0.88
PFDN6O15212 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PFDN6O15212 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.56■□□□□ 0.88
PFDN6O15212 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
PFDN6O15212 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PFDN6O15212 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN6O15212 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN6O15212 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN6O15212 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN6O15212 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
PFDN6O15212 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PFDN6O15212 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms