Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
CHD2O14647 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD2O14647 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC29.09■■■□□ 2.25
CHD2O14647 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
CHD2O14647 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CHD2O14647 MIR6786-201ENST00000616843 113 ntBASIC29.08■■■□□ 2.25
CHD2O14647 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD2O14647 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD2O14647 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC29.08■■■□□ 2.25
CHD2O14647 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC29.08■■■□□ 2.25
CHD2O14647 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC29.08■■■□□ 2.25
CHD2O14647 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC29.08■■■□□ 2.25
CHD2O14647 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC29.08■■■□□ 2.25
CHD2O14647 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD2O14647 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC29.08■■■□□ 2.25
CHD2O14647 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC29.08■■■□□ 2.25
CHD2O14647 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC29.08■■■□□ 2.25
CHD2O14647 AC092865.7-201ENST00000641832 219 ntBASIC29.08■■■□□ 2.25
CHD2O14647 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
CHD2O14647 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC29.07■■■□□ 2.24
CHD2O14647 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC29.07■■■□□ 2.24
CHD2O14647 AC026471.5-201ENST00000615068 467 ntBASIC29.07■■■□□ 2.24
CHD2O14647 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
CHD2O14647 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
CHD2O14647 AC116050.2-201ENST00000612102 1779 ntBASIC29.07■■■□□ 2.24
CHD2O14647 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CHD2O14647 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD2O14647 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC29.06■■■□□ 2.24
CHD2O14647 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD2O14647 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD2O14647 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
CHD2O14647 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CHD2O14647 AP003071.4-201ENST00000562276 1284 ntBASIC29.06■■■□□ 2.24
CHD2O14647 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC29.06■■■□□ 2.24
CHD2O14647 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CHD2O14647 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
CHD2O14647 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 KRT8P9-201ENST00000558927 1449 ntBASIC29.04■■■□□ 2.24
CHD2O14647 NUDT16P1-203ENST00000513809 620 ntBASIC29.04■■■□□ 2.24
CHD2O14647 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC29.04■■■□□ 2.24
CHD2O14647 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC29.04■■■□□ 2.24
CHD2O14647 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD2O14647 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CHD2O14647 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD2O14647 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD2O14647 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CHD2O14647 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC29.03■■■□□ 2.24
CHD2O14647 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD2O14647 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC29.03■■■□□ 2.24
CHD2O14647 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC29.03■■■□□ 2.24
CHD2O14647 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
CHD2O14647 AL356652.1-201ENST00000615962 565 ntBASIC29.03■■■□□ 2.24
CHD2O14647 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC29.03■■■□□ 2.24
CHD2O14647 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC29.03■■■□□ 2.24
CHD2O14647 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC29.03■■■□□ 2.24
CHD2O14647 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC29.02■■■□□ 2.24
CHD2O14647 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC29.02■■■□□ 2.24
CHD2O14647 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC29.02■■■□□ 2.24
CHD2O14647 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC29.02■■■□□ 2.24
CHD2O14647 AL049597.2-201ENST00000565575 961 ntBASIC29.02■■■□□ 2.24
CHD2O14647 Six3os1_6.1-201ENST00000620790 196 ntBASIC29.02■■■□□ 2.24
CHD2O14647 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD2O14647 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC29.02■■■□□ 2.24
CHD2O14647 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
CHD2O14647 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
CHD2O14647 STX5-203ENST00000394690 1568 ntTSL 5 BASIC29.01■■■□□ 2.24
CHD2O14647 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
CHD2O14647 AC010542.4-201ENST00000563151 1910 ntBASIC29.01■■■□□ 2.23
CHD2O14647 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC29.01■■■□□ 2.23
CHD2O14647 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms