Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
UPK1AO00322 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPK1AO00322 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
UPK1AO00322 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
UPK1AO00322 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1AO00322 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.55■□□□□ 0.72
UPK1AO00322 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1AO00322 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK1AO00322 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.55■□□□□ 0.72
UPK1AO00322 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 PCDHAC2-203ENST00000615316 3011 ntBASIC19.55■□□□□ 0.72
UPK1AO00322 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1AO00322 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPK1AO00322 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.55■□□□□ 0.72
UPK1AO00322 PKD1P6-201ENST00000343738 4769 ntBASIC19.55■□□□□ 0.72
UPK1AO00322 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.55■□□□□ 0.72
UPK1AO00322 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.54■□□□□ 0.72
UPK1AO00322 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.54■□□□□ 0.72
UPK1AO00322 AC104187.1-201ENST00000607510 612 ntBASIC19.54■□□□□ 0.72
UPK1AO00322 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UPK1AO00322 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPK1AO00322 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 AC027702.1-201ENST00000563810 1770 ntBASIC19.54■□□□□ 0.72
UPK1AO00322 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.54■□□□□ 0.72
UPK1AO00322 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
UPK1AO00322 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPK1AO00322 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.54■□□□□ 0.72
UPK1AO00322 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPK1AO00322 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
UPK1AO00322 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
UPK1AO00322 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.53■□□□□ 0.72
UPK1AO00322 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.53■□□□□ 0.72
UPK1AO00322 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.53■□□□□ 0.72
UPK1AO00322 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.53■□□□□ 0.72
UPK1AO00322 AC008175.2-201ENST00000612840 297 ntBASIC19.53■□□□□ 0.72
UPK1AO00322 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
UPK1AO00322 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 AP004607.4-201ENST00000530158 1459 ntBASIC19.53■□□□□ 0.72
UPK1AO00322 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPK1AO00322 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.53■□□□□ 0.72
UPK1AO00322 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK1AO00322 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 AC004854.2-201ENST00000608450 1441 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
UPK1AO00322 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK1AO00322 POU5F1P4-201ENST00000413175 1085 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 AC097381.1-201ENST00000429019 1296 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 AC010141.2-201ENST00000452426 721 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L2-201ENST00000561772 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.52■□□□□ 0.72
UPK1AO00322 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L6-201ENST00000626483 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L1-201ENST00000627662 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L8-201ENST00000629013 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L3-201ENST00000630187 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L7-201ENST00000630678 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 DUX4L5-201ENST00000630834 1275 ntBASIC19.52■□□□□ 0.72
UPK1AO00322 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.52■□□□□ 0.72
UPK1AO00322 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
UPK1AO00322 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms