Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
DDX39AO00148 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
DDX39AO00148 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.25■■□□□ 1.31
DDX39AO00148 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
DDX39AO00148 KRT17P1-201ENST00000399211 1546 ntBASIC23.24■■□□□ 1.31
DDX39AO00148 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 PARN-205ENST00000539279 1557 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC23.24■■□□□ 1.31
DDX39AO00148 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.24■■□□□ 1.31
DDX39AO00148 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
DDX39AO00148 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.24■■□□□ 1.31
DDX39AO00148 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX39AO00148 PKD1P6-201ENST00000343738 4769 ntBASIC23.24■■□□□ 1.31
DDX39AO00148 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
DDX39AO00148 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.24■■□□□ 1.31
DDX39AO00148 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
DDX39AO00148 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.23■■□□□ 1.31
DDX39AO00148 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC23.23■■□□□ 1.31
DDX39AO00148 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.23■■□□□ 1.31
DDX39AO00148 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC23.23■■□□□ 1.31
DDX39AO00148 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
DDX39AO00148 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX39AO00148 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.23■■□□□ 1.31
DDX39AO00148 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX39AO00148 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.22■■□□□ 1.31
DDX39AO00148 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
DDX39AO00148 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX39AO00148 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX39AO00148 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.22■■□□□ 1.31
DDX39AO00148 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.22■■□□□ 1.31
DDX39AO00148 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.22■■□□□ 1.31
DDX39AO00148 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC23.22■■□□□ 1.31
DDX39AO00148 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
DDX39AO00148 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 SAPCD2P1-201ENST00000395413 1184 ntBASIC23.21■■□□□ 1.31
DDX39AO00148 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 AC092118.2-201ENST00000613495 667 ntBASIC23.21■■□□□ 1.31
DDX39AO00148 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
DDX39AO00148 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
DDX39AO00148 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
DDX39AO00148 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 FEM1AP4-201ENST00000443167 1987 ntBASIC23.2■■□□□ 1.3
DDX39AO00148 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
DDX39AO00148 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 LSM12P1-201ENST00000411836 588 ntBASIC23.2■■□□□ 1.3
DDX39AO00148 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
DDX39AO00148 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX39AO00148 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 KRT18P6-201ENST00000555540 1265 ntBASIC23.2■■□□□ 1.3
DDX39AO00148 CYP2T3P-201ENST00000601990 817 ntBASIC23.2■■□□□ 1.3
DDX39AO00148 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
DDX39AO00148 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX39AO00148 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX39AO00148 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC23.19■■□□□ 1.3
DDX39AO00148 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms